Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.77■□□□□ 0.92
ITGA8P53708 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.77■□□□□ 0.92
ITGA8P53708 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ITGA8P53708 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ITGA8P53708 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ITGA8P53708 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ITGA8P53708 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.77■□□□□ 0.92
ITGA8P53708 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ITGA8P53708 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ITGA8P53708 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.77■□□□□ 0.92
ITGA8P53708 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ITGA8P53708 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ITGA8P53708 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ITGA8P53708 DPP3P2-201ENST00000416030 1696 ntBASIC20.77■□□□□ 0.91
ITGA8P53708 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITGA8P53708 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITGA8P53708 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.76■□□□□ 0.91
ITGA8P53708 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITGA8P53708 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ITGA8P53708 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.76■□□□□ 0.91
ITGA8P53708 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITGA8P53708 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.76■□□□□ 0.91
ITGA8P53708 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ITGA8P53708 AC142381.2-201ENST00000566120 298 ntBASIC20.76■□□□□ 0.91
ITGA8P53708 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.76■□□□□ 0.91
ITGA8P53708 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.76■□□□□ 0.91
ITGA8P53708 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ITGA8P53708 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
ITGA8P53708 KRT8P36-201ENST00000489121 1440 ntBASIC20.76■□□□□ 0.91
ITGA8P53708 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.76■□□□□ 0.91
ITGA8P53708 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ITGA8P53708 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITGA8P53708 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITGA8P53708 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.75■□□□□ 0.91
ITGA8P53708 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ITGA8P53708 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ITGA8P53708 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.75■□□□□ 0.91
ITGA8P53708 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.75■□□□□ 0.91
ITGA8P53708 AP001160.3-201ENST00000601484 763 ntBASIC20.75■□□□□ 0.91
ITGA8P53708 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ITGA8P53708 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ITGA8P53708 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ITGA8P53708 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ITGA8P53708 AL691432.2-201ENST00000607222 2038 ntBASIC20.75■□□□□ 0.91
ITGA8P53708 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ITGA8P53708 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ITGA8P53708 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ITGA8P53708 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ITGA8P53708 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ITGA8P53708 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ITGA8P53708 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ITGA8P53708 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
ITGA8P53708 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ITGA8P53708 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
ITGA8P53708 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ITGA8P53708 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.74■□□□□ 0.91
ITGA8P53708 AC027612.3-201ENST00000413684 1047 ntBASIC20.74■□□□□ 0.91
ITGA8P53708 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ITGA8P53708 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.74■□□□□ 0.91
ITGA8P53708 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.74■□□□□ 0.91
ITGA8P53708 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ITGA8P53708 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ITGA8P53708 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ITGA8P53708 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ITGA8P53708 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ITGA8P53708 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ITGA8P53708 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ITGA8P53708 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.74■□□□□ 0.91
ITGA8P53708 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.74■□□□□ 0.91
ITGA8P53708 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.74■□□□□ 0.91
ITGA8P53708 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ITGA8P53708 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ITGA8P53708 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.73■□□□□ 0.91
ITGA8P53708 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ITGA8P53708 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ITGA8P53708 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
ITGA8P53708 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ITGA8P53708 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
ITGA8P53708 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ITGA8P53708 AC091799.1-201ENST00000422823 811 ntBASIC20.73■□□□□ 0.91
ITGA8P53708 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.73■□□□□ 0.91
ITGA8P53708 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.73■□□□□ 0.91
ITGA8P53708 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ITGA8P53708 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.73■□□□□ 0.91
ITGA8P53708 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
ITGA8P53708 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ITGA8P53708 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ITGA8P53708 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ITGA8P53708 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA8P53708 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA8P53708 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.72■□□□□ 0.91
ITGA8P53708 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ITGA8P53708 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA8P53708 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA8P53708 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA8P53708 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.72■□□□□ 0.91
ITGA8P53708 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ITGA8P53708 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ITGA8P53708 MIR935-201ENST00000401179 91 ntBASIC20.72■□□□□ 0.91
ITGA8P53708 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms