Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.43■□□□□ 0.86
LIMK2P53671 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LIMK2P53671 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LIMK2P53671 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
LIMK2P53671 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.43■□□□□ 0.86
LIMK2P53671 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LIMK2P53671 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LIMK2P53671 AC112907.3-201ENST00000577781 2400 ntBASIC20.43■□□□□ 0.86
LIMK2P53671 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.43■□□□□ 0.86
LIMK2P53671 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.43■□□□□ 0.86
LIMK2P53671 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.43■□□□□ 0.86
LIMK2P53671 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LIMK2P53671 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LIMK2P53671 AC116050.2-201ENST00000612102 1779 ntBASIC20.42■□□□□ 0.86
LIMK2P53671 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
LIMK2P53671 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LIMK2P53671 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LIMK2P53671 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LIMK2P53671 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.42■□□□□ 0.86
LIMK2P53671 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LIMK2P53671 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LIMK2P53671 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LIMK2P53671 AFG3L1P-217ENST00000557444 2447 ntBASIC20.42■□□□□ 0.86
LIMK2P53671 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LIMK2P53671 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.42■□□□□ 0.86
LIMK2P53671 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.41■□□□□ 0.86
LIMK2P53671 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LIMK2P53671 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LIMK2P53671 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.41■□□□□ 0.86
LIMK2P53671 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LIMK2P53671 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LIMK2P53671 SLC29A4P1-201ENST00000398760 971 ntBASIC20.41■□□□□ 0.86
LIMK2P53671 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
LIMK2P53671 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.41■□□□□ 0.86
LIMK2P53671 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.41■□□□□ 0.86
LIMK2P53671 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.41■□□□□ 0.86
LIMK2P53671 AC013268.1-206ENST00000638368 961 ntBASIC20.41■□□□□ 0.86
LIMK2P53671 AC112229.1-201ENST00000639295 961 ntBASIC20.41■□□□□ 0.86
LIMK2P53671 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
LIMK2P53671 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LIMK2P53671 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LIMK2P53671 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LIMK2P53671 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.41■□□□□ 0.86
LIMK2P53671 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LIMK2P53671 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LIMK2P53671 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIMK2P53671 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIMK2P53671 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.4■□□□□ 0.86
LIMK2P53671 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
LIMK2P53671 TERF1P5-201ENST00000477545 1207 ntBASIC20.4■□□□□ 0.86
LIMK2P53671 AF201337.1-201ENST00000520239 748 ntBASIC20.4■□□□□ 0.86
LIMK2P53671 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LIMK2P53671 AC133552.2-202ENST00000575694 574 ntBASIC20.4■□□□□ 0.86
LIMK2P53671 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.4■□□□□ 0.86
LIMK2P53671 MIR2861-201ENST00000636310 90 ntBASIC20.4■□□□□ 0.86
LIMK2P53671 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIMK2P53671 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LIMK2P53671 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LIMK2P53671 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.4■□□□□ 0.86
LIMK2P53671 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIMK2P53671 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.39■□□□□ 0.86
LIMK2P53671 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.39■□□□□ 0.86
LIMK2P53671 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.39■□□□□ 0.86
LIMK2P53671 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LIMK2P53671 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LIMK2P53671 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LIMK2P53671 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LIMK2P53671 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LIMK2P53671 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
LIMK2P53671 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LIMK2P53671 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.39■□□□□ 0.85
LIMK2P53671 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LIMK2P53671 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LIMK2P53671 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.39■□□□□ 0.85
LIMK2P53671 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.39■□□□□ 0.85
LIMK2P53671 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LIMK2P53671 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
LIMK2P53671 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.39■□□□□ 0.85
LIMK2P53671 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LIMK2P53671 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.39■□□□□ 0.85
LIMK2P53671 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LIMK2P53671 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.39■□□□□ 0.85
LIMK2P53671 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LIMK2P53671 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.39■□□□□ 0.85
LIMK2P53671 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
LIMK2P53671 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LIMK2P53671 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LIMK2P53671 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LIMK2P53671 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LIMK2P53671 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LIMK2P53671 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LIMK2P53671 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LIMK2P53671 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.38■□□□□ 0.85
LIMK2P53671 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
LIMK2P53671 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.38■□□□□ 0.85
LIMK2P53671 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LIMK2P53671 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LIMK2P53671 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LIMK2P53671 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LIMK2P53671 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms