Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2JP52435 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
POLR2JP52435 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2JP52435 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
POLR2JP52435 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2JP52435 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
POLR2JP52435 AC104187.1-201ENST00000607510 612 ntBASIC19.36■□□□□ 0.69
POLR2JP52435 AC116562.4-201ENST00000641316 2276 ntBASIC19.36■□□□□ 0.69
POLR2JP52435 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
POLR2JP52435 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
POLR2JP52435 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
POLR2JP52435 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.35■□□□□ 0.69
POLR2JP52435 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2JP52435 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2JP52435 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2JP52435 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.35■□□□□ 0.69
POLR2JP52435 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2JP52435 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2JP52435 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2JP52435 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
POLR2JP52435 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2JP52435 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
POLR2JP52435 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.35■□□□□ 0.69
POLR2JP52435 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.35■□□□□ 0.69
POLR2JP52435 AL158211.5-201ENST00000623583 2518 ntBASIC19.35■□□□□ 0.69
POLR2JP52435 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2JP52435 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
POLR2JP52435 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2JP52435 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.35■□□□□ 0.69
POLR2JP52435 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
POLR2JP52435 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.35■□□□□ 0.69
POLR2JP52435 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR2JP52435 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.35■□□□□ 0.69
POLR2JP52435 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2JP52435 KRT8P36-201ENST00000489121 1440 ntBASIC19.34■□□□□ 0.69
POLR2JP52435 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2JP52435 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2JP52435 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2JP52435 DPP3P2-201ENST00000416030 1696 ntBASIC19.34■□□□□ 0.69
POLR2JP52435 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR2JP52435 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.34■□□□□ 0.69
POLR2JP52435 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2JP52435 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
POLR2JP52435 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2JP52435 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.34■□□□□ 0.69
POLR2JP52435 AP001160.3-201ENST00000601484 763 ntBASIC19.34■□□□□ 0.69
POLR2JP52435 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.34■□□□□ 0.69
POLR2JP52435 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2JP52435 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
POLR2JP52435 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2JP52435 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
POLR2JP52435 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2JP52435 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2JP52435 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR2JP52435 AC087289.5-201ENST00000586076 3175 ntBASIC19.34■□□□□ 0.69
POLR2JP52435 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.33■□□□□ 0.69
POLR2JP52435 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
POLR2JP52435 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.33■□□□□ 0.69
POLR2JP52435 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
POLR2JP52435 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
POLR2JP52435 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR2JP52435 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.33■□□□□ 0.69
POLR2JP52435 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR2JP52435 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR2JP52435 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.33■□□□□ 0.68
POLR2JP52435 AC027612.3-201ENST00000413684 1047 ntBASIC19.33■□□□□ 0.68
POLR2JP52435 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.33■□□□□ 0.68
POLR2JP52435 AC142381.2-201ENST00000566120 298 ntBASIC19.33■□□□□ 0.68
POLR2JP52435 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR2JP52435 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
POLR2JP52435 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
POLR2JP52435 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.33■□□□□ 0.68
POLR2JP52435 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR2JP52435 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR2JP52435 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR2JP52435 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLR2JP52435 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR2JP52435 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR2JP52435 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR2JP52435 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR2JP52435 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
POLR2JP52435 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR2JP52435 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLR2JP52435 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR2JP52435 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR2JP52435 CCDC92B-201ENST00000575506 885 ntBASIC19.32■□□□□ 0.68
POLR2JP52435 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.32■□□□□ 0.68
POLR2JP52435 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR2JP52435 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR2JP52435 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR2JP52435 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR2JP52435 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR2JP52435 LINC02228-203ENST00000641970 1355 ntBASIC19.32■□□□□ 0.68
POLR2JP52435 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
POLR2JP52435 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR2JP52435 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLR2JP52435 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR2JP52435 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
POLR2JP52435 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR2JP52435 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms