Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.66■□□□□ 0.58
HTR3AP46098 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HTR3AP46098 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.66■□□□□ 0.58
HTR3AP46098 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HTR3AP46098 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.66■□□□□ 0.58
HTR3AP46098 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.66■□□□□ 0.58
HTR3AP46098 MFSD11-216ENST00000590393 1141 ntBASIC18.66■□□□□ 0.58
HTR3AP46098 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HTR3AP46098 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HTR3AP46098 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HTR3AP46098 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.66■□□□□ 0.58
HTR3AP46098 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.66■□□□□ 0.58
HTR3AP46098 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.66■□□□□ 0.58
HTR3AP46098 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3AP46098 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3AP46098 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3AP46098 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3AP46098 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HTR3AP46098 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3AP46098 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3AP46098 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3AP46098 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.65■□□□□ 0.58
HTR3AP46098 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.65■□□□□ 0.58
HTR3AP46098 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.65■□□□□ 0.58
HTR3AP46098 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.65■□□□□ 0.58
HTR3AP46098 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.65■□□□□ 0.58
HTR3AP46098 AC011767.1-201ENST00000617410 1153 ntBASIC18.65■□□□□ 0.58
HTR3AP46098 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3AP46098 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HTR3AP46098 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.65■□□□□ 0.58
HTR3AP46098 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3AP46098 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HTR3AP46098 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3AP46098 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3AP46098 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
HTR3AP46098 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3AP46098 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.65■□□□□ 0.58
HTR3AP46098 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3AP46098 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3AP46098 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HTR3AP46098 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTR3AP46098 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
HTR3AP46098 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HTR3AP46098 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HTR3AP46098 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
HTR3AP46098 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HTR3AP46098 AC027702.1-201ENST00000563810 1770 ntBASIC18.64■□□□□ 0.57
HTR3AP46098 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTR3AP46098 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.64■□□□□ 0.57
HTR3AP46098 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HTR3AP46098 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.64■□□□□ 0.57
HTR3AP46098 FAM21FP-204ENST00000608637 956 ntBASIC18.64■□□□□ 0.57
HTR3AP46098 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.64■□□□□ 0.57
HTR3AP46098 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTR3AP46098 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTR3AP46098 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTR3AP46098 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTR3AP46098 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.64■□□□□ 0.57
HTR3AP46098 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTR3AP46098 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTR3AP46098 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HTR3AP46098 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR3AP46098 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTR3AP46098 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTR3AP46098 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.63■□□□□ 0.57
HTR3AP46098 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR3AP46098 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTR3AP46098 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR3AP46098 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
HTR3AP46098 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR3AP46098 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.63■□□□□ 0.57
HTR3AP46098 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.63■□□□□ 0.57
HTR3AP46098 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTR3AP46098 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTR3AP46098 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR3AP46098 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.63■□□□□ 0.57
HTR3AP46098 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HTR3AP46098 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.63■□□□□ 0.57
HTR3AP46098 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTR3AP46098 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HTR3AP46098 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR3AP46098 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTR3AP46098 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HTR3AP46098 AC007225.1-201ENST00000566331 1836 ntBASIC18.63■□□□□ 0.57
HTR3AP46098 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.63■□□□□ 0.57
HTR3AP46098 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.63■□□□□ 0.57
HTR3AP46098 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR3AP46098 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR3AP46098 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HTR3AP46098 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms