Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 AC006970.2-201ENST00000450065 779 ntBASIC19.33■□□□□ 0.68
SSR2P43308 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.33■□□□□ 0.68
SSR2P43308 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.33■□□□□ 0.68
SSR2P43308 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSR2P43308 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SSR2P43308 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSR2P43308 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SSR2P43308 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SSR2P43308 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSR2P43308 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SSR2P43308 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.32■□□□□ 0.68
SSR2P43308 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSR2P43308 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SSR2P43308 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.32■□□□□ 0.68
SSR2P43308 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSR2P43308 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSR2P43308 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSR2P43308 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.32■□□□□ 0.68
SSR2P43308 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSR2P43308 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSR2P43308 AC093787.1-201ENST00000450396 207 ntBASIC19.32■□□□□ 0.68
SSR2P43308 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.32■□□□□ 0.68
SSR2P43308 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SSR2P43308 AL050303.2-201ENST00000619798 666 ntBASIC19.32■□□□□ 0.68
SSR2P43308 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSR2P43308 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.32■□□□□ 0.68
SSR2P43308 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSR2P43308 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSR2P43308 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.32■□□□□ 0.68
SSR2P43308 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
SSR2P43308 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSR2P43308 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSR2P43308 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSR2P43308 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSR2P43308 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSR2P43308 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSR2P43308 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSR2P43308 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSR2P43308 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.31■□□□□ 0.68
SSR2P43308 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.31■□□□□ 0.68
SSR2P43308 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.31■□□□□ 0.68
SSR2P43308 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSR2P43308 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSR2P43308 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SSR2P43308 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.31■□□□□ 0.68
SSR2P43308 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.31■□□□□ 0.68
SSR2P43308 CROCCP5-201ENST00000436658 830 ntBASIC19.31■□□□□ 0.68
SSR2P43308 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSR2P43308 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.31■□□□□ 0.68
SSR2P43308 AC105036.2-201ENST00000569468 176 ntBASIC19.31■□□□□ 0.68
SSR2P43308 AC133552.2-202ENST00000575694 574 ntBASIC19.31■□□□□ 0.68
SSR2P43308 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.31■□□□□ 0.68
SSR2P43308 CYP2T3P-201ENST00000601990 817 ntBASIC19.31■□□□□ 0.68
SSR2P43308 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSR2P43308 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSR2P43308 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.31■□□□□ 0.68
SSR2P43308 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SSR2P43308 AC010980.2-201ENST00000587099 1412 ntBASIC19.31■□□□□ 0.68
SSR2P43308 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSR2P43308 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.31■□□□□ 0.68
SSR2P43308 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SSR2P43308 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSR2P43308 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSR2P43308 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SSR2P43308 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SSR2P43308 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SSR2P43308 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.3■□□□□ 0.68
SSR2P43308 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SSR2P43308 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 KRT18P68-201ENST00000392293 1000 ntBASIC19.3■□□□□ 0.68
SSR2P43308 AL512625.2-201ENST00000417533 625 ntBASIC19.3■□□□□ 0.68
SSR2P43308 AL355472.2-201ENST00000422958 438 ntBASIC19.3■□□□□ 0.68
SSR2P43308 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.3■□□□□ 0.68
SSR2P43308 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.3■□□□□ 0.68
SSR2P43308 AF201337.1-201ENST00000520239 748 ntBASIC19.3■□□□□ 0.68
SSR2P43308 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.3■□□□□ 0.68
SSR2P43308 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SSR2P43308 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SSR2P43308 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
SSR2P43308 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.3■□□□□ 0.68
SSR2P43308 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.3■□□□□ 0.68
SSR2P43308 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.3■□□□□ 0.68
SSR2P43308 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SSR2P43308 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms