Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDNFP39905 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.6■□□□□ 0.41
GDNFP39905 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDNFP39905 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDNFP39905 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GDNFP39905 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDNFP39905 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GDNFP39905 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.6■□□□□ 0.41
GDNFP39905 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GDNFP39905 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GDNFP39905 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GDNFP39905 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
GDNFP39905 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDNFP39905 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GDNFP39905 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GDNFP39905 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
GDNFP39905 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.59■□□□□ 0.41
GDNFP39905 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDNFP39905 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.59■□□□□ 0.41
GDNFP39905 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GDNFP39905 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDNFP39905 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDNFP39905 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GDNFP39905 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.59■□□□□ 0.41
GDNFP39905 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.59■□□□□ 0.41
GDNFP39905 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
GDNFP39905 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GDNFP39905 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
GDNFP39905 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GDNFP39905 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
GDNFP39905 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GDNFP39905 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
GDNFP39905 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GDNFP39905 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
GDNFP39905 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GDNFP39905 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
GDNFP39905 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
GDNFP39905 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GDNFP39905 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.58■□□□□ 0.4
GDNFP39905 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.58■□□□□ 0.4
GDNFP39905 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.58■□□□□ 0.4
GDNFP39905 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
GDNFP39905 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.58■□□□□ 0.4
GDNFP39905 MIR6084-201ENST00000622012 110 ntBASIC17.58■□□□□ 0.4
GDNFP39905 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GDNFP39905 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GDNFP39905 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.58■□□□□ 0.4
GDNFP39905 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
GDNFP39905 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GDNFP39905 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GDNFP39905 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GDNFP39905 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GDNFP39905 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.57■□□□□ 0.4
GDNFP39905 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GDNFP39905 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.57■□□□□ 0.4
GDNFP39905 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GDNFP39905 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GDNFP39905 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDNFP39905 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.57■□□□□ 0.4
GDNFP39905 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
GDNFP39905 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDNFP39905 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.57■□□□□ 0.4
GDNFP39905 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GDNFP39905 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
GDNFP39905 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDNFP39905 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDNFP39905 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GDNFP39905 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.57■□□□□ 0.4
GDNFP39905 AC012414.1-201ENST00000556676 535 ntBASIC17.57■□□□□ 0.4
GDNFP39905 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDNFP39905 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GDNFP39905 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.57■□□□□ 0.4
GDNFP39905 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDNFP39905 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDNFP39905 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.56■□□□□ 0.4
GDNFP39905 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
GDNFP39905 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GDNFP39905 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GDNFP39905 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GDNFP39905 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GDNFP39905 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
GDNFP39905 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.56■□□□□ 0.4
GDNFP39905 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.56■□□□□ 0.4
GDNFP39905 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.56■□□□□ 0.4
GDNFP39905 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.56■□□□□ 0.4
GDNFP39905 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.56■□□□□ 0.4
GDNFP39905 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.56■□□□□ 0.4
GDNFP39905 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GDNFP39905 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
GDNFP39905 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
GDNFP39905 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GDNFP39905 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
GDNFP39905 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
GDNFP39905 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GDNFP39905 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GDNFP39905 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
GDNFP39905 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.56■□□□□ 0.4
GDNFP39905 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GDNFP39905 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDNFP39905 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms