Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
KRT20P35900 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT20P35900 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
KRT20P35900 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT20P35900 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT20P35900 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
KRT20P35900 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
KRT20P35900 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT20P35900 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
KRT20P35900 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT20P35900 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
KRT20P35900 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.19■□□□□ 0.66
KRT20P35900 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT20P35900 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
KRT20P35900 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT20P35900 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT20P35900 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.19■□□□□ 0.66
KRT20P35900 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
KRT20P35900 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
KRT20P35900 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT20P35900 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT20P35900 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT20P35900 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.19■□□□□ 0.66
KRT20P35900 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT20P35900 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT20P35900 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT20P35900 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
KRT20P35900 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT20P35900 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 AC006128.1-201ENST00000624704 1661 ntBASIC19.18■□□□□ 0.66
KRT20P35900 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT20P35900 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT20P35900 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.18■□□□□ 0.66
KRT20P35900 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.18■□□□□ 0.66
KRT20P35900 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.18■□□□□ 0.66
KRT20P35900 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 AC011767.1-201ENST00000617410 1153 ntBASIC19.18■□□□□ 0.66
KRT20P35900 AC010536.3-201ENST00000620306 533 ntBASIC19.18■□□□□ 0.66
KRT20P35900 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.18■□□□□ 0.66
KRT20P35900 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
KRT20P35900 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT20P35900 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT20P35900 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.18■□□□□ 0.66
KRT20P35900 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
KRT20P35900 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT20P35900 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT20P35900 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT20P35900 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT20P35900 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT20P35900 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT20P35900 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT20P35900 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
KRT20P35900 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT20P35900 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT20P35900 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT20P35900 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT20P35900 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.17■□□□□ 0.66
KRT20P35900 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.17■□□□□ 0.66
KRT20P35900 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.17■□□□□ 0.66
KRT20P35900 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
KRT20P35900 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT20P35900 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT20P35900 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRT20P35900 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRT20P35900 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.17■□□□□ 0.66
KRT20P35900 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT20P35900 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT20P35900 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.16■□□□□ 0.66
KRT20P35900 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
KRT20P35900 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KRT20P35900 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT20P35900 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRT20P35900 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KRT20P35900 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.16■□□□□ 0.66
KRT20P35900 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KRT20P35900 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.16■□□□□ 0.66
KRT20P35900 AC243732.1-201ENST00000612648 864 ntBASIC19.16■□□□□ 0.66
KRT20P35900 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.16■□□□□ 0.66
KRT20P35900 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
KRT20P35900 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
KRT20P35900 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KRT20P35900 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.16■□□□□ 0.66
KRT20P35900 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KRT20P35900 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.16■□□□□ 0.66
KRT20P35900 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
KRT20P35900 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms