Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GDF1P27539 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDF1P27539 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
GDF1P27539 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
GDF1P27539 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.39■□□□□ 0.54
GDF1P27539 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GDF1P27539 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GDF1P27539 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
GDF1P27539 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.39■□□□□ 0.53
GDF1P27539 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.39■□□□□ 0.53
GDF1P27539 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GDF1P27539 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GDF1P27539 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.39■□□□□ 0.53
GDF1P27539 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.39■□□□□ 0.53
GDF1P27539 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.39■□□□□ 0.53
GDF1P27539 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
GDF1P27539 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GDF1P27539 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GDF1P27539 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.39■□□□□ 0.53
GDF1P27539 SOX15-203ENST00000570788 1093 ntBASIC18.39■□□□□ 0.53
GDF1P27539 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.39■□□□□ 0.53
GDF1P27539 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.39■□□□□ 0.53
GDF1P27539 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
GDF1P27539 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GDF1P27539 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
GDF1P27539 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.39■□□□□ 0.53
GDF1P27539 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.39■□□□□ 0.53
GDF1P27539 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GDF1P27539 AC005229.4-201ENST00000610085 2198 ntBASIC18.38■□□□□ 0.53
GDF1P27539 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.38■□□□□ 0.53
GDF1P27539 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GDF1P27539 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.38■□□□□ 0.53
GDF1P27539 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
GDF1P27539 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GDF1P27539 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GDF1P27539 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GDF1P27539 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.38■□□□□ 0.53
GDF1P27539 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GDF1P27539 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.38■□□□□ 0.53
GDF1P27539 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.38■□□□□ 0.53
GDF1P27539 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GDF1P27539 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.38■□□□□ 0.53
GDF1P27539 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.38■□□□□ 0.53
GDF1P27539 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.38■□□□□ 0.53
GDF1P27539 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
GDF1P27539 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.38■□□□□ 0.53
GDF1P27539 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.38■□□□□ 0.53
GDF1P27539 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GDF1P27539 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDF1P27539 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.37■□□□□ 0.53
GDF1P27539 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDF1P27539 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GDF1P27539 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GDF1P27539 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.37■□□□□ 0.53
GDF1P27539 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GDF1P27539 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.37■□□□□ 0.53
GDF1P27539 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.37■□□□□ 0.53
GDF1P27539 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.37■□□□□ 0.53
GDF1P27539 UNC93B4-201ENST00000505679 747 ntBASIC18.37■□□□□ 0.53
GDF1P27539 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.37■□□□□ 0.53
GDF1P27539 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GDF1P27539 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDF1P27539 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDF1P27539 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.37■□□□□ 0.53
GDF1P27539 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GDF1P27539 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.37■□□□□ 0.53
GDF1P27539 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDF1P27539 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.37■□□□□ 0.53
GDF1P27539 AC006128.1-201ENST00000624704 1661 ntBASIC18.37■□□□□ 0.53
GDF1P27539 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
GDF1P27539 FP700111.2-201ENST00000619190 1892 ntBASIC18.37■□□□□ 0.53
GDF1P27539 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDF1P27539 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.37■□□□□ 0.53
GDF1P27539 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDF1P27539 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.37■□□□□ 0.53
GDF1P27539 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDF1P27539 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDF1P27539 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GDF1P27539 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDF1P27539 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDF1P27539 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDF1P27539 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDF1P27539 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GDF1P27539 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDF1P27539 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.36■□□□□ 0.53
GDF1P27539 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
GDF1P27539 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
GDF1P27539 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GDF1P27539 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.36■□□□□ 0.53
GDF1P27539 AL390719.1-204ENST00000412397 1219 ntBASIC18.36■□□□□ 0.53
GDF1P27539 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
GDF1P27539 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
GDF1P27539 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDF1P27539 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.36■□□□□ 0.53
GDF1P27539 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDF1P27539 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.36■□□□□ 0.53
GDF1P27539 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
GDF1P27539 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDF1P27539 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
GDF1P27539 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms