Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC005829.2-201ENST00000571422 1056 ntBASIC17.52■□□□□ 0.4
CD40P25942 AC066615.1-201ENST00000640911 628 ntBASIC17.52■□□□□ 0.4
CD40P25942 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD40P25942 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.52■□□□□ 0.4
CD40P25942 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.52■□□□□ 0.4
CD40P25942 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD40P25942 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CD40P25942 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.52■□□□□ 0.39
CD40P25942 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CD40P25942 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD40P25942 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.51■□□□□ 0.39
CD40P25942 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CD40P25942 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD40P25942 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD40P25942 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.51■□□□□ 0.39
CD40P25942 AL390719.1-204ENST00000412397 1219 ntBASIC17.51■□□□□ 0.39
CD40P25942 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.51■□□□□ 0.39
CD40P25942 AC098590.1-201ENST00000468126 897 ntBASIC17.51■□□□□ 0.39
CD40P25942 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD40P25942 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD40P25942 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD40P25942 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.51■□□□□ 0.39
CD40P25942 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CD40P25942 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD40P25942 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.51■□□□□ 0.39
CD40P25942 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD40P25942 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.5■□□□□ 0.39
CD40P25942 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.5■□□□□ 0.39
CD40P25942 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.5■□□□□ 0.39
CD40P25942 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD40P25942 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD40P25942 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CD40P25942 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CD40P25942 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD40P25942 GCSHP5-201ENST00000443090 522 ntBASIC17.5■□□□□ 0.39
CD40P25942 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.5■□□□□ 0.39
CD40P25942 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.5■□□□□ 0.39
CD40P25942 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD40P25942 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD40P25942 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD40P25942 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD40P25942 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD40P25942 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD40P25942 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.5■□□□□ 0.39
CD40P25942 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.49■□□□□ 0.39
CD40P25942 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.49■□□□□ 0.39
CD40P25942 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.49■□□□□ 0.39
CD40P25942 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD40P25942 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD40P25942 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD40P25942 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD40P25942 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.49■□□□□ 0.39
CD40P25942 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD40P25942 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD40P25942 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD40P25942 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD40P25942 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD40P25942 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CD40P25942 POM121L13P-201ENST00000422362 380 ntBASIC17.49■□□□□ 0.39
CD40P25942 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD40P25942 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CD40P25942 AC142381.4-202ENST00000563973 229 ntBASIC17.49■□□□□ 0.39
CD40P25942 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CD40P25942 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.49■□□□□ 0.39
CD40P25942 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.49■□□□□ 0.39
CD40P25942 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD40P25942 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.49■□□□□ 0.39
CD40P25942 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD40P25942 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD40P25942 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CD40P25942 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD40P25942 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.48■□□□□ 0.39
CD40P25942 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CD40P25942 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD40P25942 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD40P25942 AL158047.1-201ENST00000445918 881 ntBASIC17.48■□□□□ 0.39
CD40P25942 RPS2P52-201ENST00000469610 820 ntBASIC17.48■□□□□ 0.39
CD40P25942 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.48■□□□□ 0.39
CD40P25942 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CD40P25942 AC006557.6-201ENST00000623071 864 ntBASIC17.48■□□□□ 0.39
CD40P25942 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD40P25942 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.48■□□□□ 0.39
CD40P25942 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD40P25942 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.48■□□□□ 0.39
CD40P25942 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD40P25942 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.48■□□□□ 0.39
CD40P25942 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD40P25942 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD40P25942 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD40P25942 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD40P25942 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD40P25942 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD40P25942 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.47■□□□□ 0.39
CD40P25942 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD40P25942 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.47■□□□□ 0.39
CD40P25942 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.47■□□□□ 0.39
CD40P25942 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.47■□□□□ 0.39
CD40P25942 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.47■□□□□ 0.39
CD40P25942 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD40P25942 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms