Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 RIC1YLR039C 3171 nt2.44□□□□□ -2.02
MSH1P25846 YFH1YDL120W 525 nt2.44□□□□□ -2.02
MSH1P25846 QCR7YDR529C 384 nt2.44□□□□□ -2.02
MSH1P25846 VMA9YCL005W-A 222 nt2.44□□□□□ -2.02
MSH1P25846 TFC3YAL001C 3483 nt2.44□□□□□ -2.02
MSH1P25846 RPS17AYML024W 411 nt2.43□□□□□ -2.02
MSH1P25846 DGR1YNL130C-A 147 nt2.43□□□□□ -2.02
MSH1P25846 SIR4YDR227W 4077 nt2.43□□□□□ -2.02
MSH1P25846 TOF1YNL273W 3717 nt2.43□□□□□ -2.02
MSH1P25846 CDC27YBL084C 2277 nt2.42□□□□□ -2.02
MSH1P25846 CSF1YLR087C 8877 nt2.42□□□□□ -2.02
MSH1P25846 TIM9YEL020W-A 264 nt2.42□□□□□ -2.02
MSH1P25846 YGL069CYGL069C 465 nt2.42□□□□□ -2.02
MSH1P25846 YKL136WYKL136W 399 nt2.42□□□□□ -2.02
MSH1P25846 UBR1YGR184C 5853 nt2.42□□□□□ -2.02
MSH1P25846 STB4YMR019W 2850 nt2.41□□□□□ -2.02
MSH1P25846 YER181CYER181C 324 nt2.41□□□□□ -2.02
MSH1P25846 YHR052W-AYHR052W-A 195 nt2.41□□□□□ -2.02
MSH1P25846 YHR054W-AYHR054W-A 195 nt2.41□□□□□ -2.02
MSH1P25846 VPS8YAL002W 3825 nt2.41□□□□□ -2.02
MSH1P25846 YBL108WYBL108W 306 nt2.41□□□□□ -2.02
MSH1P25846 YOR333CYOR333C 417 nt2.41□□□□□ -2.02
MSH1P25846 YBR121C-AYBR121C-A 159 nt2.41□□□□□ -2.02
MSH1P25846 MGM1YOR211C 2646 nt2.4□□□□□ -2.02
MSH1P25846 YLR149CYLR149C 2193 nt2.4□□□□□ -2.02
MSH1P25846 NOP14YDL148C 2433 nt2.4□□□□□ -2.02
MSH1P25846 YDR008CYDR008C 351 nt2.4□□□□□ -2.03
MSH1P25846 ABM1YJR108W 372 nt2.4□□□□□ -2.03
MSH1P25846 YAF9YNL107W 681 nt2.4□□□□□ -2.03
MSH1P25846 MCD1YDL003W 1701 nt2.39□□□□□ -2.03
MSH1P25846 VTC3YPL019C 2508 nt2.39□□□□□ -2.03
MSH1P25846 SSD1YDR293C 3753 nt2.39□□□□□ -2.03
MSH1P25846 PAU14YIL176C 363 nt2.39□□□□□ -2.03
MSH1P25846 PAU1YJL223C 363 nt2.39□□□□□ -2.03
MSH1P25846 RTT107YHR154W 3213 nt2.38□□□□□ -2.03
MSH1P25846 MNE1YOR350C 1992 nt2.38□□□□□ -2.03
MSH1P25846 NHP2YDL208W 471 nt2.38□□□□□ -2.03
MSH1P25846 YGL239CYGL239C 315 nt2.38□□□□□ -2.03
MSH1P25846 SCH9YHR205W 2475 nt2.38□□□□□ -2.03
MSH1P25846 FMP23YBR047W 528 nt2.38□□□□□ -2.03
MSH1P25846 YPL182CYPL182C 384 nt2.38□□□□□ -2.03
MSH1P25846 DIS3YOL021C 3006 nt2.38□□□□□ -2.03
MSH1P25846 NOT5YPR072W 1683 nt2.37□□□□□ -2.03
MSH1P25846 STH1YIL126W 4080 nt2.37□□□□□ -2.03
MSH1P25846 CLN3YAL040C 1743 nt2.37□□□□□ -2.03
MSH1P25846 YDL152WYDL152W 366 nt2.37□□□□□ -2.03
MSH1P25846 YKL165C-AYKL165C-A 234 nt2.37□□□□□ -2.03
MSH1P25846 YOR231C-AYOR231C-A 201 nt2.37□□□□□ -2.03
MSH1P25846 YPR099CYPR099C 357 nt2.37□□□□□ -2.03
MSH1P25846 BNI1YNL271C 5862 nt2.36□□□□□ -2.03
MSH1P25846 HOP2YGL033W 657 nt2.36□□□□□ -2.03
MSH1P25846 YIL115W-AYIL115W-A 372 nt2.36□□□□□ -2.03
MSH1P25846 YKL118WYKL118W 312 nt2.36□□□□□ -2.03
MSH1P25846 YPL038W-AYPL038W-A 192 nt2.36□□□□□ -2.03
MSH1P25846 NEO1YIL048W 3456 nt2.36□□□□□ -2.03
MSH1P25846 GRR1YJR090C 3456 nt2.35□□□□□ -2.03
MSH1P25846 YDL011CYDL011C 324 nt2.35□□□□□ -2.03
MSH1P25846 TMN3YER113C 2121 nt2.35□□□□□ -2.03
MSH1P25846 SCP160YJL080C 3669 nt2.35□□□□□ -2.03
MSH1P25846 DOT6YER088C 2013 nt2.34□□□□□ -2.03
MSH1P25846 IRR1YIL026C 3453 nt2.34□□□□□ -2.03
MSH1P25846 YHL037CYHL037C 402 nt2.34□□□□□ -2.03
MSH1P25846 HSK3YKL138C-A 210 nt2.34□□□□□ -2.03
MSH1P25846 YAL063C-AYAL063C-A 291 nt2.34□□□□□ -2.03
MSH1P25846 RPL9BYNL067W 576 nt2.34□□□□□ -2.03
MSH1P25846 PGA1YNL158W 597 nt2.34□□□□□ -2.03
MSH1P25846 YBR224WYBR224W 516 nt2.34□□□□□ -2.03
MSH1P25846 RAV1YJR033C 4074 nt2.33□□□□□ -2.04
MSH1P25846 PEP3YLR148W 2757 nt2.33□□□□□ -2.04
MSH1P25846 SET2YJL168C 2202 nt2.33□□□□□ -2.04
MSH1P25846 WIP1YDR374W-A 270 nt2.33□□□□□ -2.04
MSH1P25846 YDR413CYDR413C 576 nt2.33□□□□□ -2.04
MSH1P25846 YER097WYER097W 330 nt2.33□□□□□ -2.04
MSH1P25846 tW(UCA)QtW(UCA)Q 74 nt2.33□□□□□ -2.04
MSH1P25846 YJL052C-AYJL052C-A 120 nt2.33□□□□□ -2.04
MSH1P25846 LYS9YNR050C 1341 nt2.33□□□□□ -2.04
MSH1P25846 TRL1YJL087C 2484 nt2.33□□□□□ -2.04
MSH1P25846 SEC16YPL085W 6588 nt2.33□□□□□ -2.04
MSH1P25846 SMY1YKL079W 1971 nt2.32□□□□□ -2.04
MSH1P25846 YJR003CYJR003C 1560 nt2.32□□□□□ -2.04
MSH1P25846 VPH1YOR270C 2523 nt2.32□□□□□ -2.04
MSH1P25846 SPP41YDR464W 4308 nt2.32□□□□□ -2.04
MSH1P25846 RBK1YCR036W 1002 nt2.32□□□□□ -2.04
MSH1P25846 YHR180W-AYHR180W-A 183 nt2.32□□□□□ -2.04
MSH1P25846 YIL066W-AYIL066W-A 444 nt2.32□□□□□ -2.04
MSH1P25846 TIM18YOR297C 579 nt2.32□□□□□ -2.04
MSH1P25846 YOR394C-AYOR394C-A 168 nt2.32□□□□□ -2.04
MSH1P25846 IST2YBR086C 2841 nt2.32□□□□□ -2.04
MSH1P25846 MAM33YIL070C 801 nt2.31□□□□□ -2.04
MSH1P25846 YLR053CYLR053C 327 nt2.31□□□□□ -2.04
MSH1P25846 REV3YPL167C 4515 nt2.31□□□□□ -2.04
MSH1P25846 MNL2YLR057W 2550 nt2.31□□□□□ -2.04
MSH1P25846 USO1YDL058W 5373 nt2.31□□□□□ -2.04
MSH1P25846 APL5YPL195W 2799 nt2.3□□□□□ -2.04
MSH1P25846 YCR022CYCR022C 345 nt2.3□□□□□ -2.04
MSH1P25846 TMA10YLR327C 261 nt2.3□□□□□ -2.04
MSH1P25846 YMR031W-AYMR031W-A 327 nt2.3□□□□□ -2.04
MSH1P25846 YBR184WYBR184W 1572 nt2.3□□□□□ -2.04
MSH1P25846 PAN3YKL025C 2040 nt2.3□□□□□ -2.04
MSH1P25846 ZRG8YER033C 3231 nt2.3□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 50.7 ms