Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
APCP25054 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.24■□□□□ 0.35
APCP25054 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APCP25054 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APCP25054 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APCP25054 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APCP25054 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.24■□□□□ 0.35
APCP25054 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.24■□□□□ 0.35
APCP25054 AC023511.2-201ENST00000618803 211 ntBASIC17.24■□□□□ 0.35
APCP25054 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.24■□□□□ 0.35
APCP25054 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APCP25054 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
APCP25054 MESTP1-201ENST00000404287 994 ntBASIC17.24■□□□□ 0.35
APCP25054 YBX1P2-201ENST00000489612 999 ntBASIC17.24■□□□□ 0.35
APCP25054 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APCP25054 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.24■□□□□ 0.35
APCP25054 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
APCP25054 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.23■□□□□ 0.35
APCP25054 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.23■□□□□ 0.35
APCP25054 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APCP25054 RNF152P1-201ENST00000397754 604 ntBASIC17.23■□□□□ 0.35
APCP25054 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APCP25054 SLC25A1P4-201ENST00000567977 778 ntBASIC17.23■□□□□ 0.35
APCP25054 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.23■□□□□ 0.35
APCP25054 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
APCP25054 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APCP25054 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APCP25054 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APCP25054 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APCP25054 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
APCP25054 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APCP25054 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APCP25054 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.23■□□□□ 0.35
APCP25054 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
APCP25054 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
APCP25054 AC139887.4-201ENST00000607877 719 ntBASIC17.23■□□□□ 0.35
APCP25054 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APCP25054 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
APCP25054 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APCP25054 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.22■□□□□ 0.35
APCP25054 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APCP25054 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APCP25054 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
APCP25054 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.22■□□□□ 0.35
APCP25054 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APCP25054 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.22■□□□□ 0.35
APCP25054 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APCP25054 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.22■□□□□ 0.35
APCP25054 PGM5P4-201ENST00000421970 445 ntBASIC17.22■□□□□ 0.35
APCP25054 AC091390.4-202ENST00000476426 537 ntBASIC17.22■□□□□ 0.35
APCP25054 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.22■□□□□ 0.35
APCP25054 AL356652.1-201ENST00000615962 565 ntBASIC17.22■□□□□ 0.35
APCP25054 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.22■□□□□ 0.35
APCP25054 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APCP25054 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
APCP25054 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.21■□□□□ 0.35
APCP25054 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.21■□□□□ 0.35
APCP25054 INGX-201ENST00000359239 846 ntBASIC17.21■□□□□ 0.35
APCP25054 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
APCP25054 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APCP25054 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.21■□□□□ 0.35
APCP25054 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.21■□□□□ 0.35
APCP25054 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
APCP25054 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.21■□□□□ 0.35
APCP25054 AL031985.4-201ENST00000642138 673 ntBASIC17.21■□□□□ 0.35
APCP25054 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
APCP25054 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APCP25054 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APCP25054 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
APCP25054 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APCP25054 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
APCP25054 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APCP25054 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.21■□□□□ 0.35
APCP25054 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APCP25054 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.21■□□□□ 0.35
APCP25054 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APCP25054 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APCP25054 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APCP25054 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.21■□□□□ 0.35
APCP25054 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.21■□□□□ 0.35
APCP25054 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APCP25054 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
APCP25054 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
APCP25054 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
APCP25054 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.2■□□□□ 0.34
APCP25054 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.2■□□□□ 0.34
APCP25054 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APCP25054 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
APCP25054 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.2■□□□□ 0.34
APCP25054 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.2■□□□□ 0.34
APCP25054 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.2■□□□□ 0.34
APCP25054 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
APCP25054 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.2■□□□□ 0.34
APCP25054 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.2■□□□□ 0.34
APCP25054 AL121956.5-201ENST00000625261 221 ntBASIC17.2■□□□□ 0.34
APCP25054 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APCP25054 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.2■□□□□ 0.34
APCP25054 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
APCP25054 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.2■□□□□ 0.34
APCP25054 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms