Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP24386 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP24386 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP24386 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP24386 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP24386 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP24386 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP24386 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP24386 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CHMP24386 AL512408.1-201ENST00000569378 2000 ntBASIC18.91■□□□□ 0.62
CHMP24386 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP24386 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP24386 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CHMP24386 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP24386 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP24386 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.91■□□□□ 0.62
CHMP24386 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
CHMP24386 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP24386 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP24386 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP24386 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP24386 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP24386 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP24386 FP700111.2-201ENST00000619190 1892 ntBASIC18.9■□□□□ 0.62
CHMP24386 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP24386 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.9■□□□□ 0.62
CHMP24386 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHMP24386 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHMP24386 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP24386 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP24386 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CHMP24386 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP24386 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.9■□□□□ 0.62
CHMP24386 AC243732.1-201ENST00000612648 864 ntBASIC18.9■□□□□ 0.62
CHMP24386 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
CHMP24386 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP24386 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP24386 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP24386 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CHMP24386 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP24386 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.9■□□□□ 0.62
CHMP24386 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP24386 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP24386 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CHMP24386 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP24386 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP24386 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP24386 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHMP24386 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
CHMP24386 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.89■□□□□ 0.61
CHMP24386 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP24386 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP24386 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP24386 AC006970.2-201ENST00000450065 779 ntBASIC18.89■□□□□ 0.61
CHMP24386 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.89■□□□□ 0.61
CHMP24386 AC007322.4-201ENST00000509611 723 ntBASIC18.89■□□□□ 0.61
CHMP24386 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.89■□□□□ 0.61
CHMP24386 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.89■□□□□ 0.61
CHMP24386 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.89■□□□□ 0.61
CHMP24386 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CHMP24386 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP24386 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP24386 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMP24386 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP24386 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.88■□□□□ 0.61
CHMP24386 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP24386 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP24386 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP24386 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP24386 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP24386 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP24386 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.88■□□□□ 0.61
CHMP24386 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP24386 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.88■□□□□ 0.61
CHMP24386 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP24386 CNN2P6-201ENST00000439038 900 ntBASIC18.88■□□□□ 0.61
CHMP24386 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP24386 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHMP24386 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.88■□□□□ 0.61
CHMP24386 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP24386 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CHMP24386 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP24386 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.88■□□□□ 0.61
CHMP24386 RBM17P2-201ENST00000616397 1405 ntBASIC18.88■□□□□ 0.61
CHMP24386 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP24386 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.88■□□□□ 0.61
CHMP24386 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP24386 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP24386 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
CHMP24386 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP24386 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP24386 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHMP24386 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP24386 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP24386 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP24386 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.87■□□□□ 0.61
CHMP24386 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP24386 CROCCP5-201ENST00000436658 830 ntBASIC18.87■□□□□ 0.61
CHMP24386 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHMP24386 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms