Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
GAP43P17677 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
GAP43P17677 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.38■■□□□ 1.17
GAP43P17677 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.38■■□□□ 1.17
GAP43P17677 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.38■■□□□ 1.17
GAP43P17677 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
GAP43P17677 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.38■■□□□ 1.17
GAP43P17677 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
GAP43P17677 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.38■■□□□ 1.17
GAP43P17677 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.37■■□□□ 1.17
GAP43P17677 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
GAP43P17677 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
GAP43P17677 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GAP43P17677 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GAP43P17677 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GAP43P17677 SLC29A4P1-201ENST00000398760 971 ntBASIC22.37■■□□□ 1.17
GAP43P17677 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
GAP43P17677 GUSBP6-202ENST00000438529 1198 ntBASIC22.37■■□□□ 1.17
GAP43P17677 TSPY6P-201ENST00000448518 926 ntBASIC22.37■■□□□ 1.17
GAP43P17677 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.37■■□□□ 1.17
GAP43P17677 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.37■■□□□ 1.17
GAP43P17677 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.37■■□□□ 1.17
GAP43P17677 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
GAP43P17677 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.37■■□□□ 1.17
GAP43P17677 AL162377.1-201ENST00000618844 1793 ntBASIC22.37■■□□□ 1.17
GAP43P17677 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GAP43P17677 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
GAP43P17677 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
GAP43P17677 DPP3P2-201ENST00000416030 1696 ntBASIC22.36■■□□□ 1.17
GAP43P17677 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
GAP43P17677 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
GAP43P17677 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
GAP43P17677 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
GAP43P17677 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.36■■□□□ 1.17
GAP43P17677 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.36■■□□□ 1.17
GAP43P17677 MIPEPP3-201ENST00000412105 444 ntBASIC22.36■■□□□ 1.17
GAP43P17677 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.36■■□□□ 1.17
GAP43P17677 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.36■■□□□ 1.17
GAP43P17677 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
GAP43P17677 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
GAP43P17677 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
GAP43P17677 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
GAP43P17677 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
GAP43P17677 AL512408.1-201ENST00000569378 2000 ntBASIC22.35■■□□□ 1.17
GAP43P17677 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
GAP43P17677 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
GAP43P17677 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
GAP43P17677 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
GAP43P17677 C2orf69P4-201ENST00000565394 541 ntBASIC22.35■■□□□ 1.17
GAP43P17677 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.35■■□□□ 1.17
GAP43P17677 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.35■■□□□ 1.17
GAP43P17677 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
GAP43P17677 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
GAP43P17677 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
GAP43P17677 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.34■■□□□ 1.17
GAP43P17677 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.34■■□□□ 1.17
GAP43P17677 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.34■■□□□ 1.17
GAP43P17677 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
GAP43P17677 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.34■■□□□ 1.17
GAP43P17677 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GAP43P17677 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
GAP43P17677 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.34■■□□□ 1.17
GAP43P17677 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
GAP43P17677 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.34■■□□□ 1.17
GAP43P17677 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.34■■□□□ 1.17
GAP43P17677 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
GAP43P17677 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.34■■□□□ 1.17
GAP43P17677 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GAP43P17677 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
GAP43P17677 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
GAP43P17677 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GAP43P17677 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.34■■□□□ 1.17
GAP43P17677 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
GAP43P17677 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.34■■□□□ 1.17
GAP43P17677 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GAP43P17677 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.33■■□□□ 1.17
GAP43P17677 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
GAP43P17677 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.33■■□□□ 1.17
GAP43P17677 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
GAP43P17677 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
GAP43P17677 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
GAP43P17677 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
GAP43P17677 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.33■■□□□ 1.17
GAP43P17677 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.33■■□□□ 1.17
GAP43P17677 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
GAP43P17677 AC092118.2-201ENST00000613495 667 ntBASIC22.33■■□□□ 1.17
GAP43P17677 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.33■■□□□ 1.17
GAP43P17677 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
GAP43P17677 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
GAP43P17677 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
GAP43P17677 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.33■■□□□ 1.16
GAP43P17677 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.32■■□□□ 1.16
GAP43P17677 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.32■■□□□ 1.16
GAP43P17677 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
GAP43P17677 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.32■■□□□ 1.16
GAP43P17677 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
GAP43P17677 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.32■■□□□ 1.16
GAP43P17677 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
GAP43P17677 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
GAP43P17677 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms