Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPRP12270 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPRP12270 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.14■□□□□ 0.65
TPRP12270 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPRP12270 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPRP12270 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPRP12270 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.13■□□□□ 0.65
TPRP12270 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPRP12270 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.13■□□□□ 0.65
TPRP12270 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.13■□□□□ 0.65
TPRP12270 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPRP12270 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPRP12270 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TPRP12270 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPRP12270 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.13■□□□□ 0.65
TPRP12270 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TPRP12270 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPRP12270 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TPRP12270 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.13■□□□□ 0.65
TPRP12270 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.13■□□□□ 0.65
TPRP12270 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPRP12270 AC026271.3-201ENST00000571884 352 ntBASIC19.13■□□□□ 0.65
TPRP12270 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.13■□□□□ 0.65
TPRP12270 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TPRP12270 AP003733.4-201ENST00000623785 1697 ntBASIC19.12■□□□□ 0.65
TPRP12270 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TPRP12270 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.12■□□□□ 0.65
TPRP12270 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TPRP12270 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPRP12270 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.12■□□□□ 0.65
TPRP12270 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.12■□□□□ 0.65
TPRP12270 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPRP12270 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPRP12270 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TPRP12270 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPRP12270 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TPRP12270 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPRP12270 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.12■□□□□ 0.65
TPRP12270 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.12■□□□□ 0.65
TPRP12270 UNC93B7-201ENST00000509439 705 ntBASIC19.12■□□□□ 0.65
TPRP12270 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.12■□□□□ 0.65
TPRP12270 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPRP12270 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.11■□□□□ 0.65
TPRP12270 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.11■□□□□ 0.65
TPRP12270 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.11■□□□□ 0.65
TPRP12270 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPRP12270 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPRP12270 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.11■□□□□ 0.65
TPRP12270 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPRP12270 AL355385.1-201ENST00000606123 409 ntBASIC19.11■□□□□ 0.65
TPRP12270 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPRP12270 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPRP12270 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.11■□□□□ 0.65
TPRP12270 AC020928.2-201ENST00000588717 2197 ntBASIC19.11■□□□□ 0.65
TPRP12270 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPRP12270 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPRP12270 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPRP12270 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPRP12270 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.11■□□□□ 0.65
TPRP12270 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPRP12270 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.11■□□□□ 0.65
TPRP12270 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.11■□□□□ 0.65
TPRP12270 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPRP12270 AL121829.2-201ENST00000620908 328 ntBASIC19.11■□□□□ 0.65
TPRP12270 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TPRP12270 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPRP12270 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPRP12270 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TPRP12270 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TPRP12270 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.1■□□□□ 0.65
TPRP12270 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.1■□□□□ 0.65
TPRP12270 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.1■□□□□ 0.65
TPRP12270 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
TPRP12270 AL139125.2-201ENST00000623134 1869 ntBASIC19.1■□□□□ 0.65
TPRP12270 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPRP12270 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TPRP12270 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TPRP12270 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TPRP12270 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.1■□□□□ 0.65
TPRP12270 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.1■□□□□ 0.65
TPRP12270 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TPRP12270 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPRP12270 AC138932.3-201ENST00000567634 1902 ntBASIC19.09■□□□□ 0.65
TPRP12270 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TPRP12270 FAM220CP-201ENST00000395253 831 ntBASIC19.09■□□□□ 0.65
TPRP12270 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.09■□□□□ 0.65
TPRP12270 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.09■□□□□ 0.65
TPRP12270 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TPRP12270 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPRP12270 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TPRP12270 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPRP12270 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TPRP12270 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.08■□□□□ 0.65
TPRP12270 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.08■□□□□ 0.65
TPRP12270 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TPRP12270 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
TPRP12270 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.08■□□□□ 0.65
TPRP12270 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TPRP12270 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.08■□□□□ 0.65
TPRP12270 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms