Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCNAP12004 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCNAP12004 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.69■□□□□ 0.74
PCNAP12004 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PCNAP12004 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.69■□□□□ 0.74
PCNAP12004 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.69■□□□□ 0.74
PCNAP12004 MFSD11-216ENST00000590393 1141 ntBASIC19.69■□□□□ 0.74
PCNAP12004 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCNAP12004 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCNAP12004 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.69■□□□□ 0.74
PCNAP12004 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCNAP12004 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCNAP12004 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCNAP12004 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCNAP12004 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCNAP12004 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.68■□□□□ 0.74
PCNAP12004 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCNAP12004 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.68■□□□□ 0.74
PCNAP12004 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCNAP12004 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
PCNAP12004 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCNAP12004 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.68■□□□□ 0.74
PCNAP12004 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCNAP12004 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCNAP12004 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCNAP12004 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCNAP12004 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCNAP12004 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.68■□□□□ 0.74
PCNAP12004 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCNAP12004 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCNAP12004 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.68■□□□□ 0.74
PCNAP12004 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.68■□□□□ 0.74
PCNAP12004 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.68■□□□□ 0.74
PCNAP12004 GABARAPL3-202ENST00000624044 1851 ntBASIC19.68■□□□□ 0.74
PCNAP12004 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PCNAP12004 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.68■□□□□ 0.74
PCNAP12004 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.68■□□□□ 0.74
PCNAP12004 AFG3L1P-217ENST00000557444 2447 ntBASIC19.67■□□□□ 0.74
PCNAP12004 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCNAP12004 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
PCNAP12004 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCNAP12004 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCNAP12004 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PCNAP12004 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCNAP12004 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.67■□□□□ 0.74
PCNAP12004 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
PCNAP12004 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.67■□□□□ 0.74
PCNAP12004 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCNAP12004 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.67■□□□□ 0.74
PCNAP12004 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCNAP12004 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PCNAP12004 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.67■□□□□ 0.74
PCNAP12004 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCNAP12004 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCNAP12004 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PCNAP12004 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCNAP12004 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCNAP12004 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCNAP12004 AC020907.5-201ENST00000624372 1936 ntBASIC19.66■□□□□ 0.74
PCNAP12004 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCNAP12004 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PCNAP12004 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCNAP12004 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.66■□□□□ 0.74
PCNAP12004 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.66■□□□□ 0.74
PCNAP12004 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.66■□□□□ 0.74
PCNAP12004 AL591742.1-201ENST00000604433 565 ntBASIC19.66■□□□□ 0.74
PCNAP12004 AC011767.1-201ENST00000617410 1153 ntBASIC19.66■□□□□ 0.74
PCNAP12004 MIR2861-201ENST00000636310 90 ntBASIC19.66■□□□□ 0.74
PCNAP12004 AC013268.1-206ENST00000638368 961 ntBASIC19.66■□□□□ 0.74
PCNAP12004 AC112229.1-201ENST00000639295 961 ntBASIC19.66■□□□□ 0.74
PCNAP12004 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCNAP12004 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCNAP12004 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.66■□□□□ 0.74
PCNAP12004 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.66■□□□□ 0.74
PCNAP12004 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCNAP12004 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCNAP12004 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PCNAP12004 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCNAP12004 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCNAP12004 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
PCNAP12004 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.65■□□□□ 0.74
PCNAP12004 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCNAP12004 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.65■□□□□ 0.74
PCNAP12004 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.65■□□□□ 0.74
PCNAP12004 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCNAP12004 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCNAP12004 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCNAP12004 AC006015.1-201ENST00000429970 570 ntBASIC19.65■□□□□ 0.74
PCNAP12004 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCNAP12004 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCNAP12004 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCNAP12004 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCNAP12004 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCNAP12004 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
PCNAP12004 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.65■□□□□ 0.74
PCNAP12004 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
PCNAP12004 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCNAP12004 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.65■□□□□ 0.74
PCNAP12004 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.64■□□□□ 0.73
PCNAP12004 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms