Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.2■□□□□ 0.66
LAMP1P11279 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
LAMP1P11279 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.2■□□□□ 0.66
LAMP1P11279 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LAMP1P11279 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
LAMP1P11279 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LAMP1P11279 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.2■□□□□ 0.66
LAMP1P11279 AC010536.3-201ENST00000620306 533 ntBASIC19.2■□□□□ 0.66
LAMP1P11279 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LAMP1P11279 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LAMP1P11279 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LAMP1P11279 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LAMP1P11279 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LAMP1P11279 DPP3P2-201ENST00000416030 1696 ntBASIC19.2■□□□□ 0.66
LAMP1P11279 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.2■□□□□ 0.66
LAMP1P11279 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.2■□□□□ 0.66
LAMP1P11279 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LAMP1P11279 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
LAMP1P11279 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LAMP1P11279 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.19■□□□□ 0.66
LAMP1P11279 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LAMP1P11279 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LAMP1P11279 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LAMP1P11279 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LAMP1P11279 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.19■□□□□ 0.66
LAMP1P11279 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.19■□□□□ 0.66
LAMP1P11279 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LAMP1P11279 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.19■□□□□ 0.66
LAMP1P11279 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.19■□□□□ 0.66
LAMP1P11279 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.19■□□□□ 0.66
LAMP1P11279 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.19■□□□□ 0.66
LAMP1P11279 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.19■□□□□ 0.66
LAMP1P11279 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.19■□□□□ 0.66
LAMP1P11279 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LAMP1P11279 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LAMP1P11279 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LAMP1P11279 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.19■□□□□ 0.66
LAMP1P11279 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LAMP1P11279 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LAMP1P11279 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.19■□□□□ 0.66
LAMP1P11279 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMP1P11279 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMP1P11279 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LAMP1P11279 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMP1P11279 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LAMP1P11279 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.18■□□□□ 0.66
LAMP1P11279 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMP1P11279 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LAMP1P11279 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMP1P11279 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LAMP1P11279 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.18■□□□□ 0.66
LAMP1P11279 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.18■□□□□ 0.66
LAMP1P11279 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LAMP1P11279 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.18■□□□□ 0.66
LAMP1P11279 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.18■□□□□ 0.66
LAMP1P11279 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
LAMP1P11279 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMP1P11279 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMP1P11279 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LAMP1P11279 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMP1P11279 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.18■□□□□ 0.66
LAMP1P11279 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LAMP1P11279 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMP1P11279 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LAMP1P11279 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LAMP1P11279 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMP1P11279 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LAMP1P11279 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMP1P11279 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.17■□□□□ 0.66
LAMP1P11279 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMP1P11279 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LAMP1P11279 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LAMP1P11279 AL591742.1-201ENST00000604433 565 ntBASIC19.17■□□□□ 0.66
LAMP1P11279 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMP1P11279 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LAMP1P11279 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMP1P11279 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LAMP1P11279 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMP1P11279 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LAMP1P11279 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.16■□□□□ 0.66
LAMP1P11279 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMP1P11279 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMP1P11279 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LAMP1P11279 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LAMP1P11279 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMP1P11279 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LAMP1P11279 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMP1P11279 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMP1P11279 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMP1P11279 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.16■□□□□ 0.66
LAMP1P11279 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LAMP1P11279 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LAMP1P11279 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.16■□□□□ 0.66
LAMP1P11279 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LAMP1P11279 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LAMP1P11279 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMP1P11279 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.16■□□□□ 0.66
LAMP1P11279 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMP1P11279 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.15■□□□□ 0.66
LAMP1P11279 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms