Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.74■□□□□ 0.43
UBCP0CG48 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBCP0CG48 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
UBCP0CG48 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
UBCP0CG48 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UBCP0CG48 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
UBCP0CG48 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBCP0CG48 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBCP0CG48 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBCP0CG48 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBCP0CG48 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.74■□□□□ 0.43
UBCP0CG48 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBCP0CG48 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
UBCP0CG48 TCF3P1-201ENST00000423021 1937 ntBASIC17.74■□□□□ 0.43
UBCP0CG48 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBCP0CG48 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
UBCP0CG48 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
UBCP0CG48 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.73■□□□□ 0.43
UBCP0CG48 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBCP0CG48 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
UBCP0CG48 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBCP0CG48 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBCP0CG48 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBCP0CG48 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
UBCP0CG48 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBCP0CG48 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBCP0CG48 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBCP0CG48 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.73■□□□□ 0.43
UBCP0CG48 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBCP0CG48 AC123595.1-201ENST00000440769 1046 ntBASIC17.73■□□□□ 0.43
UBCP0CG48 SLC7A5P2-201ENST00000553010 536 ntBASIC17.73■□□□□ 0.43
UBCP0CG48 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.73■□□□□ 0.43
UBCP0CG48 AC243732.1-201ENST00000612648 864 ntBASIC17.73■□□□□ 0.43
UBCP0CG48 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.73■□□□□ 0.43
UBCP0CG48 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
UBCP0CG48 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.73■□□□□ 0.43
UBCP0CG48 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.72■□□□□ 0.43
UBCP0CG48 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
UBCP0CG48 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBCP0CG48 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBCP0CG48 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBCP0CG48 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBCP0CG48 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
UBCP0CG48 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
UBCP0CG48 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBCP0CG48 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
UBCP0CG48 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.72■□□□□ 0.43
UBCP0CG48 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.72■□□□□ 0.43
UBCP0CG48 AC005837.3-201ENST00000612163 286 ntBASIC17.72■□□□□ 0.43
UBCP0CG48 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.72■□□□□ 0.43
UBCP0CG48 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
UBCP0CG48 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.72■□□□□ 0.43
UBCP0CG48 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.72■□□□□ 0.43
UBCP0CG48 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBCP0CG48 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
UBCP0CG48 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.72■□□□□ 0.43
UBCP0CG48 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBCP0CG48 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
UBCP0CG48 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBCP0CG48 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBCP0CG48 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBCP0CG48 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.72■□□□□ 0.43
UBCP0CG48 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.72■□□□□ 0.43
UBCP0CG48 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
UBCP0CG48 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.71■□□□□ 0.43
UBCP0CG48 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBCP0CG48 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBCP0CG48 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBCP0CG48 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.71■□□□□ 0.43
UBCP0CG48 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBCP0CG48 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBCP0CG48 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBCP0CG48 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.71■□□□□ 0.43
UBCP0CG48 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.71■□□□□ 0.43
UBCP0CG48 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.71■□□□□ 0.43
UBCP0CG48 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.71■□□□□ 0.43
UBCP0CG48 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBCP0CG48 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBCP0CG48 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBCP0CG48 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
UBCP0CG48 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBCP0CG48 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBCP0CG48 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.71■□□□□ 0.42
UBCP0CG48 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBCP0CG48 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBCP0CG48 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBCP0CG48 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBCP0CG48 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
UBCP0CG48 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBCP0CG48 AC007322.3-201ENST00000426526 701 ntBASIC17.7■□□□□ 0.42
UBCP0CG48 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.7■□□□□ 0.42
UBCP0CG48 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.7■□□□□ 0.42
UBCP0CG48 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.7■□□□□ 0.42
UBCP0CG48 FAM21FP-204ENST00000608637 956 ntBASIC17.7■□□□□ 0.42
UBCP0CG48 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBCP0CG48 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
UBCP0CG48 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBCP0CG48 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.7■□□□□ 0.42
UBCP0CG48 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBCP0CG48 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms