Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SNRPA1P09661 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SNRPA1P09661 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.97■■□□□ 1.75
SNRPA1P09661 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SNRPA1P09661 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNRPA1P09661 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
SNRPA1P09661 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SNRPA1P09661 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SNRPA1P09661 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
SNRPA1P09661 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SNRPA1P09661 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC25.97■■□□□ 1.75
SNRPA1P09661 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SNRPA1P09661 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC25.97■■□□□ 1.75
SNRPA1P09661 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNRPA1P09661 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNRPA1P09661 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SNRPA1P09661 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SNRPA1P09661 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNRPA1P09661 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SNRPA1P09661 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SNRPA1P09661 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.96■■□□□ 1.75
SNRPA1P09661 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
SNRPA1P09661 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNRPA1P09661 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SNRPA1P09661 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC25.96■■□□□ 1.75
SNRPA1P09661 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC25.96■■□□□ 1.75
SNRPA1P09661 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNRPA1P09661 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.96■■□□□ 1.75
SNRPA1P09661 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
SNRPA1P09661 FEM1AP4-201ENST00000443167 1987 ntBASIC25.96■■□□□ 1.75
SNRPA1P09661 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNRPA1P09661 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
SNRPA1P09661 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SNRPA1P09661 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.95■■□□□ 1.75
SNRPA1P09661 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SNRPA1P09661 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.75
SNRPA1P09661 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.75
SNRPA1P09661 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SNRPA1P09661 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC25.95■■□□□ 1.74
SNRPA1P09661 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.95■■□□□ 1.74
SNRPA1P09661 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.95■■□□□ 1.74
SNRPA1P09661 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
SNRPA1P09661 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
SNRPA1P09661 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SNRPA1P09661 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.95■■□□□ 1.74
SNRPA1P09661 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC25.95■■□□□ 1.74
SNRPA1P09661 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.95■■□□□ 1.74
SNRPA1P09661 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC25.95■■□□□ 1.74
SNRPA1P09661 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SNRPA1P09661 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SNRPA1P09661 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
SNRPA1P09661 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SNRPA1P09661 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SNRPA1P09661 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SNRPA1P09661 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SNRPA1P09661 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SNRPA1P09661 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
SNRPA1P09661 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.94■■□□□ 1.74
SNRPA1P09661 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
SNRPA1P09661 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.94■■□□□ 1.74
SNRPA1P09661 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SNRPA1P09661 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SNRPA1P09661 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SNRPA1P09661 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
SNRPA1P09661 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC25.93■■□□□ 1.74
SNRPA1P09661 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
SNRPA1P09661 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
SNRPA1P09661 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SNRPA1P09661 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC25.93■■□□□ 1.74
SNRPA1P09661 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SNRPA1P09661 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC25.93■■□□□ 1.74
SNRPA1P09661 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.93■■□□□ 1.74
SNRPA1P09661 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC25.93■■□□□ 1.74
SNRPA1P09661 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC25.93■■□□□ 1.74
SNRPA1P09661 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.93■■□□□ 1.74
SNRPA1P09661 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC25.93■■□□□ 1.74
SNRPA1P09661 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
SNRPA1P09661 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SNRPA1P09661 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SNRPA1P09661 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SNRPA1P09661 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC25.92■■□□□ 1.74
SNRPA1P09661 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
SNRPA1P09661 AL121829.2-201ENST00000620908 328 ntBASIC25.92■■□□□ 1.74
SNRPA1P09661 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.92■■□□□ 1.74
SNRPA1P09661 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
SNRPA1P09661 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
SNRPA1P09661 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
SNRPA1P09661 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC25.91■■□□□ 1.74
SNRPA1P09661 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC25.91■■□□□ 1.74
SNRPA1P09661 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SNRPA1P09661 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SNRPA1P09661 PRKY-204ENST00000533551 1019 ntBASIC25.91■■□□□ 1.74
SNRPA1P09661 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.91■■□□□ 1.74
SNRPA1P09661 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SNRPA1P09661 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC25.91■■□□□ 1.74
SNRPA1P09661 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SNRPA1P09661 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
SNRPA1P09661 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
SNRPA1P09661 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SNRPA1P09661 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms