Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPARCP09486 AC091799.1-201ENST00000422823 811 ntBASIC18.01■□□□□ 0.47
SPARCP09486 AC007322.3-201ENST00000426526 701 ntBASIC18.01■□□□□ 0.47
SPARCP09486 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.01■□□□□ 0.47
SPARCP09486 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.01■□□□□ 0.47
SPARCP09486 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.01■□□□□ 0.47
SPARCP09486 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPARCP09486 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SPARCP09486 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPARCP09486 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPARCP09486 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPARCP09486 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPARCP09486 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPARCP09486 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPARCP09486 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPARCP09486 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPARCP09486 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPARCP09486 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SPARCP09486 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18■□□□□ 0.47
SPARCP09486 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPARCP09486 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
SPARCP09486 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18■□□□□ 0.47
SPARCP09486 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18■□□□□ 0.47
SPARCP09486 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SPARCP09486 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18■□□□□ 0.47
SPARCP09486 AC243732.1-201ENST00000612648 864 ntBASIC18■□□□□ 0.47
SPARCP09486 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPARCP09486 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SPARCP09486 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SPARCP09486 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18■□□□□ 0.47
SPARCP09486 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPARCP09486 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18■□□□□ 0.47
SPARCP09486 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SPARCP09486 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18■□□□□ 0.47
SPARCP09486 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPARCP09486 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPARCP09486 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18■□□□□ 0.47
SPARCP09486 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPARCP09486 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SPARCP09486 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPARCP09486 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.99■□□□□ 0.47
SPARCP09486 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.99■□□□□ 0.47
SPARCP09486 AC019069.1-201ENST00000610008 1333 ntBASIC17.99■□□□□ 0.47
SPARCP09486 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SPARCP09486 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SPARCP09486 SMG8-203ENST00000578922 2178 ntBASIC17.99■□□□□ 0.47
SPARCP09486 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPARCP09486 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPARCP09486 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPARCP09486 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPARCP09486 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.99■□□□□ 0.47
SPARCP09486 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPARCP09486 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SPARCP09486 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPARCP09486 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SPARCP09486 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
SPARCP09486 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SPARCP09486 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.98■□□□□ 0.47
SPARCP09486 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SPARCP09486 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPARCP09486 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.98■□□□□ 0.47
SPARCP09486 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
SPARCP09486 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPARCP09486 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPARCP09486 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPARCP09486 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPARCP09486 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPARCP09486 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPARCP09486 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPARCP09486 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPARCP09486 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.98■□□□□ 0.47
SPARCP09486 SLC7A5P1-201ENST00000568957 537 ntBASIC17.98■□□□□ 0.47
SPARCP09486 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPARCP09486 UBE2DNL-204ENST00000602536 740 ntBASIC17.98■□□□□ 0.47
SPARCP09486 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.98■□□□□ 0.47
SPARCP09486 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPARCP09486 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPARCP09486 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.98■□□□□ 0.47
SPARCP09486 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
SPARCP09486 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPARCP09486 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPARCP09486 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SPARCP09486 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SPARCP09486 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPARCP09486 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPARCP09486 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SPARCP09486 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.97■□□□□ 0.47
SPARCP09486 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPARCP09486 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPARCP09486 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SPARCP09486 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPARCP09486 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SPARCP09486 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.97■□□□□ 0.47
SPARCP09486 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SPARCP09486 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPARCP09486 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.97■□□□□ 0.47
SPARCP09486 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPARCP09486 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPARCP09486 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SPARCP09486 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms