Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 PRM8YGL053W 714 nt1.41□□□□□ -2.18
RAD3P06839 IRC19YLL033W 693 nt1.41□□□□□ -2.18
RAD3P06839 SEC22YLR268W 645 nt1.41□□□□□ -2.18
RAD3P06839 YBL083CYBL083C 426 nt1.41□□□□□ -2.18
RAD3P06839 BST1YFL025C 3090 nt1.41□□□□□ -2.18
RAD3P06839 FRK1YPL141C 2598 nt1.4□□□□□ -2.19
RAD3P06839 MSC6YOR354C 2079 nt1.4□□□□□ -2.19
RAD3P06839 RTR2YDR066C 591 nt1.4□□□□□ -2.19
RAD3P06839 tH(GUG)E1tH(GUG)E1 72 nt1.4□□□□□ -2.19
RAD3P06839 tH(GUG)E2tH(GUG)E2 72 nt1.4□□□□□ -2.19
RAD3P06839 tH(GUG)G1tH(GUG)G1 72 nt1.4□□□□□ -2.19
RAD3P06839 tH(GUG)G2tH(GUG)G2 72 nt1.4□□□□□ -2.19
RAD3P06839 CHZ1YER030W 462 nt1.4□□□□□ -2.19
RAD3P06839 tH(GUG)HtH(GUG)H 72 nt1.4□□□□□ -2.19
RAD3P06839 tH(GUG)KtH(GUG)K 72 nt1.4□□□□□ -2.19
RAD3P06839 tH(GUG)MtH(GUG)M 72 nt1.4□□□□□ -2.19
RAD3P06839 LSO2YGR169C-A 279 nt1.4□□□□□ -2.19
RAD3P06839 RTT102YGR275W 474 nt1.4□□□□□ -2.19
RAD3P06839 RPC10YHR143W-A 213 nt1.4□□□□□ -2.19
RAD3P06839 YIL029CYIL029C 429 nt1.4□□□□□ -2.19
RAD3P06839 GMC2YLR445W 567 nt1.4□□□□□ -2.19
RAD3P06839 IRR1YIL026C 3453 nt1.39□□□□□ -2.19
RAD3P06839 VPS52YDR484W 1926 nt1.39□□□□□ -2.19
RAD3P06839 RVS161YCR009C 798 nt1.39□□□□□ -2.19
RAD3P06839 YDL041WYDL041W 354 nt1.39□□□□□ -2.19
RAD3P06839 YIL020C-AYIL020C-A 339 nt1.39□□□□□ -2.19
RAD3P06839 YJR079WYJR079W 330 nt1.39□□□□□ -2.19
RAD3P06839 YJR140W-AYJR140W-A 150 nt1.39□□□□□ -2.19
RAD3P06839 YJR141WYJR141W 1044 nt1.39□□□□□ -2.19
RAD3P06839 YKL023C-AYKL023C-A 228 nt1.39□□□□□ -2.19
RAD3P06839 RPL37AYLR185W 267 nt1.39□□□□□ -2.19
RAD3P06839 YPL197CYPL197C 414 nt1.39□□□□□ -2.19
RAD3P06839 CTR9YOL145C 3234 nt1.39□□□□□ -2.19
RAD3P06839 SEC21YNL287W 2808 nt1.38□□□□□ -2.19
RAD3P06839 SGD1YLR336C 2700 nt1.38□□□□□ -2.19
RAD3P06839 YER121WYER121W 345 nt1.38□□□□□ -2.19
RAD3P06839 YFL012W-AYFL012W-A 375 nt1.38□□□□□ -2.19
RAD3P06839 CTK3YML112W 891 nt1.38□□□□□ -2.19
RAD3P06839 PET123YOR158W 957 nt1.38□□□□□ -2.19
RAD3P06839 RCN2YOR220W 798 nt1.38□□□□□ -2.19
RAD3P06839 IRC16YPR038W 360 nt1.38□□□□□ -2.19
RAD3P06839 SPO13YHR014W 876 nt1.37□□□□□ -2.19
RAD3P06839 YLR140WYLR140W 327 nt1.37□□□□□ -2.19
RAD3P06839 COX7YMR256C 183 nt1.37□□□□□ -2.19
RAD3P06839 YBR224WYBR224W 516 nt1.37□□□□□ -2.19
RAD3P06839 YBR012W-AYBR012W-A 1323 nt1.37□□□□□ -2.19
RAD3P06839 YOR142W-AYOR142W-A 1323 nt1.37□□□□□ -2.19
RAD3P06839 YPR158W-AYPR158W-A 1323 nt1.37□□□□□ -2.19
RAD3P06839 RLM1YPL089C 2031 nt1.37□□□□□ -2.19
RAD3P06839 UTP13YLR222C 2454 nt1.37□□□□□ -2.19
RAD3P06839 CDC25YLR310C 4770 nt1.36□□□□□ -2.19
RAD3P06839 CDC24YAL041W 2565 nt1.36□□□□□ -2.19
RAD3P06839 YKL044WYKL044W 321 nt1.36□□□□□ -2.19
RAD3P06839 PKR1YMR123W 369 nt1.36□□□□□ -2.19
RAD3P06839 SNU56YDR240C 1479 nt1.36□□□□□ -2.19
RAD3P06839 PEP3YLR148W 2757 nt1.35□□□□□ -2.19
RAD3P06839 IES5YER092W 378 nt1.35□□□□□ -2.19
RAD3P06839 NCA2YPR155C 1851 nt1.35□□□□□ -2.19
RAD3P06839 MDS3YGL197W 4464 nt1.34□□□□□ -2.19
RAD3P06839 KAR3YPR141C 2190 nt1.34□□□□□ -2.19
RAD3P06839 YHR214C-CYHR214C-C 1437 nt1.34□□□□□ -2.19
RAD3P06839 YDL158CYDL158C 309 nt1.34□□□□□ -2.19
RAD3P06839 tT(UGU)Q1tT(UGU)Q1 76 nt1.34□□□□□ -2.19
RAD3P06839 AFB1YLR040C 675 nt1.34□□□□□ -2.19
RAD3P06839 YML003WYML003W 873 nt1.34□□□□□ -2.19
RAD3P06839 YNR025CYNR025C 360 nt1.34□□□□□ -2.19
RAD3P06839 YSY6YBR162W-A 198 nt1.34□□□□□ -2.19
RAD3P06839 SMY1YKL079W 1971 nt1.34□□□□□ -2.2
RAD3P06839 YNL284C-BYNL284C-B 5268 nt1.33□□□□□ -2.2
RAD3P06839 ALK1YGL021W 2283 nt1.33□□□□□ -2.2
RAD3P06839 TRM732YMR259C 4263 nt1.33□□□□□ -2.2
RAD3P06839 PHR1YOR386W 1698 nt1.33□□□□□ -2.2
RAD3P06839 TTI1YKL033W 3117 nt1.33□□□□□ -2.2
RAD3P06839 EGD1YPL037C 474 nt1.33□□□□□ -2.2
RAD3P06839 YJL022WYJL022W 309 nt1.32□□□□□ -2.2
RAD3P06839 ABM1YJR108W 372 nt1.32□□□□□ -2.2
RAD3P06839 BER1YLR412W 825 nt1.32□□□□□ -2.2
RAD3P06839 CGI121YML036W 546 nt1.32□□□□□ -2.2
RAD3P06839 PAC1YOR269W 1485 nt1.31□□□□□ -2.2
RAD3P06839 KAP122YGL016W 3246 nt1.31□□□□□ -2.2
RAD3P06839 SNF5YBR289W 2718 nt1.31□□□□□ -2.2
RAD3P06839 snR79snR79 84 nt1.31□□□□□ -2.2
RAD3P06839 YKL111CYKL111C 336 nt1.31□□□□□ -2.2
RAD3P06839 YKL183C-AYKL183C-A 213 nt1.31□□□□□ -2.2
RAD3P06839 GAL7YBR018C 1101 nt1.31□□□□□ -2.2
RAD3P06839 YPR153WYPR153W 423 nt1.31□□□□□ -2.2
RAD3P06839 EST2YLR318W 2655 nt1.3□□□□□ -2.2
RAD3P06839 YER188C-AYER188C-A 300 nt1.3□□□□□ -2.2
RAD3P06839 VPS55YJR044C 423 nt1.3□□□□□ -2.2
RAD3P06839 ILM1YJR118C 612 nt1.3□□□□□ -2.2
RAD3P06839 CIC1YHR052W 1131 nt1.29□□□□□ -2.2
RAD3P06839 YJL015CYJL015C 285 nt1.29□□□□□ -2.2
RAD3P06839 STE18YJR086W 333 nt1.29□□□□□ -2.2
RAD3P06839 YKL068W-AYKL068W-A 237 nt1.29□□□□□ -2.2
RAD3P06839 COF1YLL050C 432 nt1.29□□□□□ -2.2
RAD3P06839 APL2YKL135C 2181 nt1.29□□□□□ -2.2
RAD3P06839 MLH3YPL164C 2148 nt1.28□□□□□ -2.2
RAD3P06839 RAD9YDR217C 3930 nt1.28□□□□□ -2.2
RAD3P06839 SMC4YLR086W 4257 nt1.28□□□□□ -2.2
RAD3P06839 snR84snR84 550 nt1.28□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 131.5 ms