Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.17■□□□□ 0.34
CD3DP04234 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.17■□□□□ 0.34
CD3DP04234 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD3DP04234 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.17■□□□□ 0.34
CD3DP04234 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.17■□□□□ 0.34
CD3DP04234 DUX4L19-201ENST00000557448 1267 ntBASIC17.17■□□□□ 0.34
CD3DP04234 AL512631.2-201ENST00000604634 923 ntBASIC17.17■□□□□ 0.34
CD3DP04234 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CD3DP04234 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD3DP04234 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.17■□□□□ 0.34
CD3DP04234 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD3DP04234 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CD3DP04234 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.17■□□□□ 0.34
CD3DP04234 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD3DP04234 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CD3DP04234 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD3DP04234 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD3DP04234 AC120498.9-201ENST00000339021 3867 ntBASIC17.16■□□□□ 0.34
CD3DP04234 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD3DP04234 AC061975.6-201ENST00000579045 1553 ntBASIC17.16■□□□□ 0.34
CD3DP04234 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD3DP04234 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD3DP04234 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.16■□□□□ 0.34
CD3DP04234 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CD3DP04234 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.16■□□□□ 0.34
CD3DP04234 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CD3DP04234 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.16■□□□□ 0.34
CD3DP04234 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD3DP04234 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.16■□□□□ 0.34
CD3DP04234 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
CD3DP04234 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD3DP04234 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD3DP04234 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CD3DP04234 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD3DP04234 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.16■□□□□ 0.34
CD3DP04234 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD3DP04234 AC005224.4-201ENST00000583262 1652 ntBASIC17.16■□□□□ 0.34
CD3DP04234 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD3DP04234 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD3DP04234 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD3DP04234 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.16■□□□□ 0.34
CD3DP04234 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD3DP04234 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD3DP04234 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD3DP04234 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD3DP04234 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD3DP04234 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD3DP04234 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD3DP04234 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.15■□□□□ 0.34
CD3DP04234 TMEM179-206ENST00000616017 1645 ntBASIC17.15■□□□□ 0.34
CD3DP04234 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CD3DP04234 RARRES2P1-201ENST00000474487 481 ntBASIC17.15■□□□□ 0.34
CD3DP04234 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.15■□□□□ 0.34
CD3DP04234 AC133561.4-201ENST00000566112 224 ntBASIC17.15■□□□□ 0.34
CD3DP04234 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.15■□□□□ 0.34
CD3DP04234 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD3DP04234 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD3DP04234 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD3DP04234 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.15■□□□□ 0.34
CD3DP04234 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD3DP04234 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD3DP04234 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD3DP04234 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD3DP04234 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CD3DP04234 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CD3DP04234 AL691432.2-201ENST00000607222 2038 ntBASIC17.14■□□□□ 0.34
CD3DP04234 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CD3DP04234 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD3DP04234 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.14■□□□□ 0.33
CD3DP04234 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD3DP04234 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.14■□□□□ 0.33
CD3DP04234 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CD3DP04234 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD3DP04234 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD3DP04234 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.14■□□□□ 0.33
CD3DP04234 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.14■□□□□ 0.33
CD3DP04234 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD3DP04234 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.14■□□□□ 0.33
CD3DP04234 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD3DP04234 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD3DP04234 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD3DP04234 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD3DP04234 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.14■□□□□ 0.33
CD3DP04234 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD3DP04234 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD3DP04234 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD3DP04234 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD3DP04234 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD3DP04234 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD3DP04234 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CD3DP04234 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD3DP04234 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CD3DP04234 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD3DP04234 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CD3DP04234 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD3DP04234 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CD3DP04234 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD3DP04234 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.13■□□□□ 0.33
CD3DP04234 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD3DP04234 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms