Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.25■□□□□ 0.03
LTAP01374 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.25■□□□□ 0.03
LTAP01374 MIR4466-201ENST00000606121 54 ntBASIC15.25■□□□□ 0.03
LTAP01374 AC233992.3-201ENST00000607491 485 ntBASIC15.25■□□□□ 0.03
LTAP01374 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.25■□□□□ 0.03
LTAP01374 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.25■□□□□ 0.03
LTAP01374 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LTAP01374 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LTAP01374 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LTAP01374 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LTAP01374 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LTAP01374 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LTAP01374 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LTAP01374 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LTAP01374 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LTAP01374 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LTAP01374 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
LTAP01374 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LTAP01374 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LTAP01374 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.24■□□□□ 0.03
LTAP01374 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LTAP01374 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LTAP01374 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LTAP01374 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.24■□□□□ 0.03
LTAP01374 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
LTAP01374 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LTAP01374 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LTAP01374 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LTAP01374 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LTAP01374 POU5F1P4-201ENST00000413175 1085 ntBASIC15.24■□□□□ 0.03
LTAP01374 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.24■□□□□ 0.03
LTAP01374 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.24■□□□□ 0.03
LTAP01374 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.24■□□□□ 0.03
LTAP01374 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LTAP01374 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LTAP01374 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.24■□□□□ 0.03
LTAP01374 AC126544.1-201ENST00000580842 1059 ntBASIC15.24■□□□□ 0.03
LTAP01374 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.24■□□□□ 0.03
LTAP01374 RARRES2P11-201ENST00000635158 484 ntBASIC15.24■□□□□ 0.03
LTAP01374 AC105233.4-201ENST00000642045 216 ntBASIC15.24■□□□□ 0.03
LTAP01374 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LTAP01374 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LTAP01374 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.24■□□□□ 0.03
LTAP01374 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LTAP01374 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LTAP01374 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LTAP01374 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.24■□□□□ 0.03
LTAP01374 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LTAP01374 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.24■□□□□ 0.03
LTAP01374 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LTAP01374 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LTAP01374 TREX1-205ENST00000625293 1783 ntBASIC15.24■□□□□ 0.03
LTAP01374 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.24■□□□□ 0.03
LTAP01374 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.23■□□□□ 0.03
LTAP01374 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.23■□□□□ 0.03
LTAP01374 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LTAP01374 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LTAP01374 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LTAP01374 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LTAP01374 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LTAP01374 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LTAP01374 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LTAP01374 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
LTAP01374 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LTAP01374 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.23■□□□□ 0.03
LTAP01374 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.23■□□□□ 0.03
LTAP01374 GUSBP5-201ENST00000418136 578 ntBASIC15.23■□□□□ 0.03
LTAP01374 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.23■□□□□ 0.03
LTAP01374 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LTAP01374 AC008175.2-201ENST00000612840 297 ntBASIC15.23■□□□□ 0.03
LTAP01374 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.23■□□□□ 0.03
LTAP01374 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LTAP01374 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LTAP01374 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LTAP01374 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.23■□□□□ 0.03
LTAP01374 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.23■□□□□ 0.03
LTAP01374 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.23■□□□□ 0.03
LTAP01374 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LTAP01374 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LTAP01374 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.22■□□□□ 0.03
LTAP01374 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LTAP01374 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LTAP01374 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LTAP01374 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LTAP01374 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.22■□□□□ 0.03
LTAP01374 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.22■□□□□ 0.03
LTAP01374 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LTAP01374 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LTAP01374 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LTAP01374 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LTAP01374 AC245052.3-201ENST00000450182 901 ntBASIC15.22■□□□□ 0.03
LTAP01374 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.22■□□□□ 0.03
LTAP01374 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LTAP01374 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LTAP01374 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LTAP01374 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.22■□□□□ 0.03
LTAP01374 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LTAP01374 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LTAP01374 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.22■□□□□ 0.03
LTAP01374 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms