Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PRAMEF1O95521 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF1O95521 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF1O95521 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF1O95521 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF1O95521 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF1O95521 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF1O95521 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.19■□□□□ 0.82
PRAMEF1O95521 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PRAMEF1O95521 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PRAMEF1O95521 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF1O95521 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.19■□□□□ 0.82
PRAMEF1O95521 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF1O95521 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.19■□□□□ 0.82
PRAMEF1O95521 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PRAMEF1O95521 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF1O95521 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF1O95521 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF1O95521 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF1O95521 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF1O95521 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF1O95521 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF1O95521 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF1O95521 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF1O95521 GABARAPL3-202ENST00000624044 1851 ntBASIC20.18■□□□□ 0.82
PRAMEF1O95521 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.18■□□□□ 0.82
PRAMEF1O95521 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.18■□□□□ 0.82
PRAMEF1O95521 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF1O95521 AC104771.1-201ENST00000603335 964 ntBASIC20.18■□□□□ 0.82
PRAMEF1O95521 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.18■□□□□ 0.82
PRAMEF1O95521 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.18■□□□□ 0.82
PRAMEF1O95521 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF1O95521 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF1O95521 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF1O95521 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.17■□□□□ 0.82
PRAMEF1O95521 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF1O95521 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.17■□□□□ 0.82
PRAMEF1O95521 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF1O95521 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF1O95521 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PRAMEF1O95521 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF1O95521 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF1O95521 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.17■□□□□ 0.82
PRAMEF1O95521 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF1O95521 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PRAMEF1O95521 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF1O95521 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.17■□□□□ 0.82
PRAMEF1O95521 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.17■□□□□ 0.82
PRAMEF1O95521 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PRAMEF1O95521 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PRAMEF1O95521 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF1O95521 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.17■□□□□ 0.82
PRAMEF1O95521 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PRAMEF1O95521 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.16■□□□□ 0.82
PRAMEF1O95521 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF1O95521 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF1O95521 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF1O95521 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.16■□□□□ 0.82
PRAMEF1O95521 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF1O95521 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.16■□□□□ 0.82
PRAMEF1O95521 HLA-L-209ENST00000420110 1011 ntBASIC20.16■□□□□ 0.82
PRAMEF1O95521 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PRAMEF1O95521 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF1O95521 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.16■□□□□ 0.82
PRAMEF1O95521 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF1O95521 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF1O95521 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF1O95521 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PRAMEF1O95521 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF1O95521 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF1O95521 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF1O95521 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF1O95521 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF1O95521 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF1O95521 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PRAMEF1O95521 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
PRAMEF1O95521 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF1O95521 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF1O95521 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.15■□□□□ 0.82
PRAMEF1O95521 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PRAMEF1O95521 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF1O95521 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.15■□□□□ 0.82
PRAMEF1O95521 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF1O95521 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF1O95521 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
PRAMEF1O95521 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.15■□□□□ 0.82
PRAMEF1O95521 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
PRAMEF1O95521 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.15■□□□□ 0.82
PRAMEF1O95521 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.15■□□□□ 0.82
PRAMEF1O95521 AC092118.2-201ENST00000613495 667 ntBASIC20.15■□□□□ 0.82
PRAMEF1O95521 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.15■□□□□ 0.82
PRAMEF1O95521 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PRAMEF1O95521 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF1O95521 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.15■□□□□ 0.82
PRAMEF1O95521 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF1O95521 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF1O95521 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
PRAMEF1O95521 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.14■□□□□ 0.81
PRAMEF1O95521 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.14■□□□□ 0.81
PRAMEF1O95521 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms