Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.97■□□□□ 0.31
ABCA1O95477 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ABCA1O95477 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.97■□□□□ 0.31
ABCA1O95477 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ABCA1O95477 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
ABCA1O95477 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
ABCA1O95477 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ABCA1O95477 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ABCA1O95477 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ABCA1O95477 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ABCA1O95477 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ABCA1O95477 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ABCA1O95477 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ABCA1O95477 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.96■□□□□ 0.31
ABCA1O95477 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ABCA1O95477 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.96■□□□□ 0.31
ABCA1O95477 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ABCA1O95477 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ABCA1O95477 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
ABCA1O95477 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.96■□□□□ 0.31
ABCA1O95477 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ABCA1O95477 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.96■□□□□ 0.31
ABCA1O95477 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ABCA1O95477 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ABCA1O95477 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ABCA1O95477 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ABCA1O95477 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ABCA1O95477 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.96■□□□□ 0.31
ABCA1O95477 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ABCA1O95477 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.96■□□□□ 0.31
ABCA1O95477 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ABCA1O95477 AC087499.1-201ENST00000418141 1075 ntBASIC16.96■□□□□ 0.31
ABCA1O95477 TSPY15P-201ENST00000457163 923 ntBASIC16.96■□□□□ 0.31
ABCA1O95477 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ABCA1O95477 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.96■□□□□ 0.31
ABCA1O95477 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ABCA1O95477 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ABCA1O95477 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ABCA1O95477 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ABCA1O95477 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.95■□□□□ 0.3
ABCA1O95477 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ABCA1O95477 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.95■□□□□ 0.3
ABCA1O95477 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.95■□□□□ 0.3
ABCA1O95477 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ABCA1O95477 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ABCA1O95477 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ABCA1O95477 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ABCA1O95477 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ABCA1O95477 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ABCA1O95477 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ABCA1O95477 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.95■□□□□ 0.3
ABCA1O95477 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
ABCA1O95477 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ABCA1O95477 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ABCA1O95477 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
ABCA1O95477 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ABCA1O95477 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.94■□□□□ 0.3
ABCA1O95477 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.94■□□□□ 0.3
ABCA1O95477 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.94■□□□□ 0.3
ABCA1O95477 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCA1O95477 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.94■□□□□ 0.3
ABCA1O95477 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.94■□□□□ 0.3
ABCA1O95477 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.94■□□□□ 0.3
ABCA1O95477 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ABCA1O95477 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.94■□□□□ 0.3
ABCA1O95477 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCA1O95477 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.94■□□□□ 0.3
ABCA1O95477 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ABCA1O95477 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.94■□□□□ 0.3
ABCA1O95477 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.94■□□□□ 0.3
ABCA1O95477 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.94■□□□□ 0.3
ABCA1O95477 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.94■□□□□ 0.3
ABCA1O95477 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ABCA1O95477 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.94■□□□□ 0.3
ABCA1O95477 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
ABCA1O95477 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCA1O95477 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCA1O95477 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCA1O95477 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCA1O95477 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCA1O95477 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ABCA1O95477 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.94■□□□□ 0.3
ABCA1O95477 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.94■□□□□ 0.3
ABCA1O95477 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.94■□□□□ 0.3
ABCA1O95477 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.94■□□□□ 0.3
ABCA1O95477 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCA1O95477 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ABCA1O95477 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCA1O95477 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCA1O95477 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ABCA1O95477 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ABCA1O95477 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA1O95477 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.93■□□□□ 0.3
ABCA1O95477 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA1O95477 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.93■□□□□ 0.3
ABCA1O95477 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA1O95477 FAM99A-202ENST00000538190 1989 ntBASIC16.93■□□□□ 0.3
ABCA1O95477 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ABCA1O95477 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.93■□□□□ 0.3
ABCA1O95477 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms