Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT3O75175 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT3O75175 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT3O75175 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT3O75175 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CNOT3O75175 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT3O75175 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT3O75175 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT3O75175 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CNOT3O75175 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.57■□□□□ 0.72
CNOT3O75175 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
CNOT3O75175 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT3O75175 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.56■□□□□ 0.72
CNOT3O75175 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT3O75175 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT3O75175 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CNOT3O75175 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.56■□□□□ 0.72
CNOT3O75175 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT3O75175 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.56■□□□□ 0.72
CNOT3O75175 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT3O75175 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.56■□□□□ 0.72
CNOT3O75175 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT3O75175 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT3O75175 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT3O75175 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CNOT3O75175 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT3O75175 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT3O75175 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT3O75175 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT3O75175 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CNOT3O75175 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.55■□□□□ 0.72
CNOT3O75175 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT3O75175 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CNOT3O75175 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.55■□□□□ 0.72
CNOT3O75175 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.55■□□□□ 0.72
CNOT3O75175 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT3O75175 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.55■□□□□ 0.72
CNOT3O75175 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.55■□□□□ 0.72
CNOT3O75175 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT3O75175 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT3O75175 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT3O75175 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
CNOT3O75175 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT3O75175 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT3O75175 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
CNOT3O75175 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
CNOT3O75175 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.55■□□□□ 0.72
CNOT3O75175 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CNOT3O75175 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT3O75175 AL157384.1-201ENST00000445995 2473 ntBASIC19.54■□□□□ 0.72
CNOT3O75175 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT3O75175 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT3O75175 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT3O75175 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CNOT3O75175 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CNOT3O75175 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.54■□□□□ 0.72
CNOT3O75175 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.54■□□□□ 0.72
CNOT3O75175 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.54■□□□□ 0.72
CNOT3O75175 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.54■□□□□ 0.72
CNOT3O75175 AC083880.1-201ENST00000608266 535 ntBASIC19.54■□□□□ 0.72
CNOT3O75175 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CNOT3O75175 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CNOT3O75175 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.54■□□□□ 0.72
CNOT3O75175 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT3O75175 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CNOT3O75175 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT3O75175 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CNOT3O75175 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT3O75175 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
CNOT3O75175 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.53■□□□□ 0.72
CNOT3O75175 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT3O75175 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT3O75175 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT3O75175 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT3O75175 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT3O75175 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT3O75175 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT3O75175 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.53■□□□□ 0.72
CNOT3O75175 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.53■□□□□ 0.72
CNOT3O75175 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CNOT3O75175 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT3O75175 AL355472.2-201ENST00000422958 438 ntBASIC19.53■□□□□ 0.72
CNOT3O75175 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.53■□□□□ 0.72
CNOT3O75175 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.53■□□□□ 0.72
CNOT3O75175 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.53■□□□□ 0.72
CNOT3O75175 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.53■□□□□ 0.72
CNOT3O75175 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.53■□□□□ 0.72
CNOT3O75175 MYC-209ENST00000641252 345 ntBASIC19.53■□□□□ 0.72
CNOT3O75175 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT3O75175 FEM1AP4-201ENST00000443167 1987 ntBASIC19.53■□□□□ 0.72
CNOT3O75175 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.53■□□□□ 0.72
CNOT3O75175 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT3O75175 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT3O75175 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT3O75175 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CNOT3O75175 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CNOT3O75175 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.52■□□□□ 0.72
CNOT3O75175 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT3O75175 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT3O75175 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms