Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PEX1O43933 AC016769.1-201ENST00000409132 1010 ntBASIC19.68■□□□□ 0.74
PEX1O43933 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.68■□□□□ 0.74
PEX1O43933 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.68■□□□□ 0.74
PEX1O43933 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PEX1O43933 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PEX1O43933 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.68■□□□□ 0.74
PEX1O43933 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PEX1O43933 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.68■□□□□ 0.74
PEX1O43933 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PEX1O43933 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PEX1O43933 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PEX1O43933 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PEX1O43933 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.67■□□□□ 0.74
PEX1O43933 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PEX1O43933 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PEX1O43933 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.67■□□□□ 0.74
PEX1O43933 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PEX1O43933 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.67■□□□□ 0.74
PEX1O43933 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PEX1O43933 KRT19P1-201ENST00000405746 1186 ntBASIC19.67■□□□□ 0.74
PEX1O43933 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PEX1O43933 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PEX1O43933 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.67■□□□□ 0.74
PEX1O43933 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PEX1O43933 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PEX1O43933 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PEX1O43933 AC116562.4-201ENST00000641316 2276 ntBASIC19.67■□□□□ 0.74
PEX1O43933 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.67■□□□□ 0.74
PEX1O43933 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PEX1O43933 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PEX1O43933 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PEX1O43933 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.66■□□□□ 0.74
PEX1O43933 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PEX1O43933 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PEX1O43933 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PEX1O43933 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PEX1O43933 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.66■□□□□ 0.74
PEX1O43933 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.66■□□□□ 0.74
PEX1O43933 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.66■□□□□ 0.74
PEX1O43933 AC007225.1-201ENST00000566331 1836 ntBASIC19.66■□□□□ 0.74
PEX1O43933 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PEX1O43933 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PEX1O43933 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PEX1O43933 AC099778.1-201ENST00000568593 1911 ntBASIC19.66■□□□□ 0.74
PEX1O43933 AL512408.1-201ENST00000569378 2000 ntBASIC19.66■□□□□ 0.74
PEX1O43933 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PEX1O43933 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PEX1O43933 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PEX1O43933 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PEX1O43933 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
PEX1O43933 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PEX1O43933 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PEX1O43933 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PEX1O43933 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PEX1O43933 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.65■□□□□ 0.74
PEX1O43933 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.65■□□□□ 0.74
PEX1O43933 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PEX1O43933 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.65■□□□□ 0.74
PEX1O43933 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.65■□□□□ 0.74
PEX1O43933 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.65■□□□□ 0.74
PEX1O43933 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.65■□□□□ 0.74
PEX1O43933 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PEX1O43933 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PEX1O43933 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PEX1O43933 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PEX1O43933 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PEX1O43933 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.65■□□□□ 0.74
PEX1O43933 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PEX1O43933 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.65■□□□□ 0.74
PEX1O43933 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
PEX1O43933 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PEX1O43933 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.64■□□□□ 0.74
PEX1O43933 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
PEX1O43933 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PEX1O43933 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PEX1O43933 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PEX1O43933 AC006015.1-201ENST00000429970 570 ntBASIC19.64■□□□□ 0.73
PEX1O43933 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.64■□□□□ 0.73
PEX1O43933 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.64■□□□□ 0.73
PEX1O43933 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PEX1O43933 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.64■□□□□ 0.73
PEX1O43933 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.64■□□□□ 0.73
PEX1O43933 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PEX1O43933 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.64■□□□□ 0.73
PEX1O43933 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.64■□□□□ 0.73
PEX1O43933 TNXA-203ENST00000507684 2038 ntBASIC19.64■□□□□ 0.73
PEX1O43933 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PEX1O43933 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.64■□□□□ 0.73
PEX1O43933 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PEX1O43933 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.64■□□□□ 0.73
PEX1O43933 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX1O43933 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX1O43933 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX1O43933 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PEX1O43933 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX1O43933 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX1O43933 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PEX1O43933 AP004607.7-201ENST00000527152 1677 ntBASIC19.63■□□□□ 0.73
PEX1O43933 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms