Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 AC092720.2-201ENST00000602388 1665 ntBASIC19.43■□□□□ 0.7
NDUFS4O43181 AC092667.1-201ENST00000434301 2586 ntBASIC19.42■□□□□ 0.7
NDUFS4O43181 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
NDUFS4O43181 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFS4O43181 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.42■□□□□ 0.7
NDUFS4O43181 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NDUFS4O43181 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NDUFS4O43181 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFS4O43181 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NDUFS4O43181 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFS4O43181 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFS4O43181 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.42■□□□□ 0.7
NDUFS4O43181 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.42■□□□□ 0.7
NDUFS4O43181 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFS4O43181 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFS4O43181 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFS4O43181 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFS4O43181 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFS4O43181 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.42■□□□□ 0.7
NDUFS4O43181 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.42■□□□□ 0.7
NDUFS4O43181 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.41■□□□□ 0.7
NDUFS4O43181 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.41■□□□□ 0.7
NDUFS4O43181 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.41■□□□□ 0.7
NDUFS4O43181 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
NDUFS4O43181 ID1-201ENST00000376105 1233 ntBASIC19.41■□□□□ 0.7
NDUFS4O43181 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
NDUFS4O43181 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.41■□□□□ 0.7
NDUFS4O43181 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.41■□□□□ 0.7
NDUFS4O43181 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NDUFS4O43181 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.41■□□□□ 0.7
NDUFS4O43181 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.41■□□□□ 0.7
NDUFS4O43181 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS4O43181 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS4O43181 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NDUFS4O43181 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS4O43181 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS4O43181 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.4■□□□□ 0.7
NDUFS4O43181 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS4O43181 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.4■□□□□ 0.7
NDUFS4O43181 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.4■□□□□ 0.7
NDUFS4O43181 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.4■□□□□ 0.7
NDUFS4O43181 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.4■□□□□ 0.7
NDUFS4O43181 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.4■□□□□ 0.7
NDUFS4O43181 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NDUFS4O43181 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS4O43181 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS4O43181 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.4■□□□□ 0.7
NDUFS4O43181 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS4O43181 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS4O43181 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NDUFS4O43181 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS4O43181 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NDUFS4O43181 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
NDUFS4O43181 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NDUFS4O43181 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
NDUFS4O43181 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NDUFS4O43181 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NDUFS4O43181 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.39■□□□□ 0.7
NDUFS4O43181 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NDUFS4O43181 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.39■□□□□ 0.69
NDUFS4O43181 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.39■□□□□ 0.69
NDUFS4O43181 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NDUFS4O43181 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.39■□□□□ 0.69
NDUFS4O43181 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
NDUFS4O43181 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.39■□□□□ 0.69
NDUFS4O43181 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NDUFS4O43181 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS4O43181 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms