Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC3O15379 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.71■□□□□ 0.75
HDAC3O15379 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC3O15379 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC3O15379 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC3O15379 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.71■□□□□ 0.75
HDAC3O15379 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC3O15379 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HDAC3O15379 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC3O15379 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.7■□□□□ 0.74
HDAC3O15379 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC3O15379 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.7■□□□□ 0.74
HDAC3O15379 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC3O15379 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC3O15379 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC3O15379 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.7■□□□□ 0.74
HDAC3O15379 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC3O15379 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.7■□□□□ 0.74
HDAC3O15379 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.7■□□□□ 0.74
HDAC3O15379 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC3O15379 AF213884.3-201ENST00000563833 479 ntBASIC19.7■□□□□ 0.74
HDAC3O15379 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.7■□□□□ 0.74
HDAC3O15379 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC3O15379 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC3O15379 AC098818.2-201ENST00000564925 2320 ntBASIC19.7■□□□□ 0.74
HDAC3O15379 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC3O15379 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.7■□□□□ 0.74
HDAC3O15379 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.7■□□□□ 0.74
HDAC3O15379 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC3O15379 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC3O15379 AL691432.2-201ENST00000607222 2038 ntBASIC19.69■□□□□ 0.74
HDAC3O15379 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC3O15379 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.69■□□□□ 0.74
HDAC3O15379 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HDAC3O15379 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC3O15379 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC3O15379 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.69■□□□□ 0.74
HDAC3O15379 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.69■□□□□ 0.74
HDAC3O15379 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HDAC3O15379 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC3O15379 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.69■□□□□ 0.74
HDAC3O15379 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.69■□□□□ 0.74
HDAC3O15379 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.69■□□□□ 0.74
HDAC3O15379 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC3O15379 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.69■□□□□ 0.74
HDAC3O15379 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.69■□□□□ 0.74
HDAC3O15379 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC3O15379 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC3O15379 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC3O15379 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC3O15379 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.69■□□□□ 0.74
HDAC3O15379 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.69■□□□□ 0.74
HDAC3O15379 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC3O15379 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC3O15379 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC3O15379 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC3O15379 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HDAC3O15379 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC3O15379 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HDAC3O15379 DPP3P2-201ENST00000416030 1696 ntBASIC19.68■□□□□ 0.74
HDAC3O15379 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HDAC3O15379 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC3O15379 AC010141.2-201ENST00000452426 721 ntBASIC19.68■□□□□ 0.74
HDAC3O15379 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.68■□□□□ 0.74
HDAC3O15379 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.68■□□□□ 0.74
HDAC3O15379 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC3O15379 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.68■□□□□ 0.74
HDAC3O15379 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC3O15379 KRT8P36-201ENST00000489121 1440 ntBASIC19.68■□□□□ 0.74
HDAC3O15379 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.67■□□□□ 0.74
HDAC3O15379 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.67■□□□□ 0.74
HDAC3O15379 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HDAC3O15379 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.67■□□□□ 0.74
HDAC3O15379 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC3O15379 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HDAC3O15379 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC3O15379 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC3O15379 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.67■□□□□ 0.74
HDAC3O15379 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.67■□□□□ 0.74
HDAC3O15379 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
HDAC3O15379 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC3O15379 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC3O15379 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.67■□□□□ 0.74
HDAC3O15379 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HDAC3O15379 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HDAC3O15379 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC3O15379 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC3O15379 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC3O15379 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.66■□□□□ 0.74
HDAC3O15379 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC3O15379 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.66■□□□□ 0.74
HDAC3O15379 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC3O15379 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC3O15379 AL358852.1-201ENST00000623174 1268 ntBASIC19.66■□□□□ 0.74
HDAC3O15379 AL136967.2-201ENST00000623968 743 ntBASIC19.66■□□□□ 0.74
HDAC3O15379 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.66■□□□□ 0.74
HDAC3O15379 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HDAC3O15379 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.66■□□□□ 0.74
HDAC3O15379 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HDAC3O15379 BX119927.1-201ENST00000636596 1552 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms