Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
HFM1A2PYH4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC30.17■■■□□ 2.42
HFM1A2PYH4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC30.17■■■□□ 2.42
HFM1A2PYH4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC30.17■■■□□ 2.42
HFM1A2PYH4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
HFM1A2PYH4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
HFM1A2PYH4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
HFM1A2PYH4 H19-201ENST00000411754 1788 ntTSL 5 BASIC30.16■■■□□ 2.42
HFM1A2PYH4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC30.16■■■□□ 2.42
HFM1A2PYH4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
HFM1A2PYH4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
HFM1A2PYH4 RER1-204ENST00000378518 522 ntTSL 3 BASIC30.16■■■□□ 2.42
HFM1A2PYH4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
HFM1A2PYH4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
HFM1A2PYH4 POM121L13P-201ENST00000422362 380 ntBASIC30.16■■■□□ 2.42
HFM1A2PYH4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC30.16■■■□□ 2.42
HFM1A2PYH4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
HFM1A2PYH4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC30.16■■■□□ 2.42
HFM1A2PYH4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC30.16■■■□□ 2.42
HFM1A2PYH4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
HFM1A2PYH4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
HFM1A2PYH4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
HFM1A2PYH4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
HFM1A2PYH4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC30.15■■■□□ 2.42
HFM1A2PYH4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
HFM1A2PYH4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
HFM1A2PYH4 KRT18P29-201ENST00000397031 1267 ntBASIC30.15■■■□□ 2.42
HFM1A2PYH4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
HFM1A2PYH4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
HFM1A2PYH4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
HFM1A2PYH4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC30.15■■■□□ 2.42
HFM1A2PYH4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC30.15■■■□□ 2.42
HFM1A2PYH4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC30.15■■■□□ 2.42
HFM1A2PYH4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC30.14■■■□□ 2.42
HFM1A2PYH4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
HFM1A2PYH4 GCSHP5-201ENST00000443090 522 ntBASIC30.14■■■□□ 2.42
HFM1A2PYH4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
HFM1A2PYH4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC30.14■■■□□ 2.42
HFM1A2PYH4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.41
HFM1A2PYH4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC30.14■■■□□ 2.41
HFM1A2PYH4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
HFM1A2PYH4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
HFM1A2PYH4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC30.13■■■□□ 2.41
HFM1A2PYH4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC30.13■■■□□ 2.41
HFM1A2PYH4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC30.13■■■□□ 2.41
HFM1A2PYH4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
HFM1A2PYH4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC30.13■■■□□ 2.41
HFM1A2PYH4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC30.13■■■□□ 2.41
HFM1A2PYH4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
HFM1A2PYH4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
HFM1A2PYH4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
HFM1A2PYH4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC30.12■■■□□ 2.41
HFM1A2PYH4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
HFM1A2PYH4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
HFM1A2PYH4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
HFM1A2PYH4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
HFM1A2PYH4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
HFM1A2PYH4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
HFM1A2PYH4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
HFM1A2PYH4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
HFM1A2PYH4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC30.12■■■□□ 2.41
HFM1A2PYH4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
HFM1A2PYH4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
HFM1A2PYH4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
HFM1A2PYH4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC30.12■■■□□ 2.41
HFM1A2PYH4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC30.12■■■□□ 2.41
HFM1A2PYH4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC30.12■■■□□ 2.41
HFM1A2PYH4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
HFM1A2PYH4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC30.12■■■□□ 2.41
HFM1A2PYH4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
HFM1A2PYH4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
HFM1A2PYH4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
HFM1A2PYH4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC30.11■■■□□ 2.41
HFM1A2PYH4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
HFM1A2PYH4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
HFM1A2PYH4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
HFM1A2PYH4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
HFM1A2PYH4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
HFM1A2PYH4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC30.11■■■□□ 2.41
HFM1A2PYH4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
HFM1A2PYH4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
HFM1A2PYH4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC30.1■■■□□ 2.41
HFM1A2PYH4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
HFM1A2PYH4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
HFM1A2PYH4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
HFM1A2PYH4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
HFM1A2PYH4 RPS2P52-201ENST00000469610 820 ntBASIC30.1■■■□□ 2.41
HFM1A2PYH4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC30.1■■■□□ 2.41
HFM1A2PYH4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
HFM1A2PYH4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC30.1■■■□□ 2.41
HFM1A2PYH4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC30.1■■■□□ 2.41
HFM1A2PYH4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
HFM1A2PYH4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC30.1■■■□□ 2.41
HFM1A2PYH4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
HFM1A2PYH4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
HFM1A2PYH4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
HFM1A2PYH4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC30.1■■■□□ 2.41
HFM1A2PYH4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC30.09■■■□□ 2.41
HFM1A2PYH4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
HFM1A2PYH4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms