Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 IGHV3-19-201ENST00000521488 291 ntBASIC17.68■□□□□ 0.42
SHISA3A0PJX4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.68■□□□□ 0.42
SHISA3A0PJX4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SHISA3A0PJX4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 GUSBP5-201ENST00000418136 578 ntBASIC17.67■□□□□ 0.42
SHISA3A0PJX4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 AC026471.1-201ENST00000564629 3026 ntBASIC17.67■□□□□ 0.42
SHISA3A0PJX4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 Z82202.1-201ENST00000623446 1880 ntBASIC17.67■□□□□ 0.42
SHISA3A0PJX4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHISA3A0PJX4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 BX119927.1-201ENST00000636596 1552 ntBASIC17.66■□□□□ 0.42
SHISA3A0PJX4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 DPP3P2-201ENST00000416030 1696 ntBASIC17.66■□□□□ 0.42
SHISA3A0PJX4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.66■□□□□ 0.42
SHISA3A0PJX4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHISA3A0PJX4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SHISA3A0PJX4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 MIR4767-201ENST00000582827 78 ntBASIC17.64■□□□□ 0.41
SHISA3A0PJX4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 AC105233.4-201ENST00000642045 216 ntBASIC17.64■□□□□ 0.41
SHISA3A0PJX4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms