Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRDV1A0A1B0GX56 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 AC093503.3-201ENST00000624917 2352 ntBASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRDV1A0A1B0GX56 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRDV1A0A1B0GX56 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 BX119927.1-201ENST00000636596 1552 ntBASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.79■□□□□ 0.44
TRDV1A0A1B0GX56 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRDV1A0A1B0GX56 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms