Protein–RNA interactions for Protein: A0A0K0K1A5

TRBV6-5, T-cell receptor beta variable 6-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-5A0A0K0K1A5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 TNXA-203ENST00000507684 2038 ntBASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-5A0A0K0K1A5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 AL691432.2-201ENST00000607222 2038 ntBASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 DPP3P2-201ENST00000416030 1696 ntBASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 KRT87P-202ENST00000534226 1464 ntBASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 TPRG1LP1-201ENST00000598702 760 ntBASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
TRBV6-5A0A0K0K1A5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-5A0A0K0K1A5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.33□□□□□ -0.11
TRBV6-5A0A0K0K1A5 AP000974.1-201ENST00000623909 2387 ntBASIC14.33□□□□□ -0.11
TRBV6-5A0A0K0K1A5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-5A0A0K0K1A5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-5A0A0K0K1A5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV6-5A0A0K0K1A5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
TRBV6-5A0A0K0K1A5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 TREX1-205ENST00000625293 1783 ntBASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV6-5A0A0K0K1A5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-5A0A0K0K1A5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-5A0A0K0K1A5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
TRBV6-5A0A0K0K1A5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV6-5A0A0K0K1A5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-5A0A0K0K1A5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
TRBV6-5A0A0K0K1A5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-5A0A0K0K1A5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRBV6-5A0A0K0K1A5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-5A0A0K0K1A5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
TRBV6-5A0A0K0K1A5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV6-5A0A0K0K1A5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.32□□□□□ -0.12
TRBV6-5A0A0K0K1A5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRBV6-5A0A0K0K1A5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms