Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 TCF3P1-201ENST00000423021 1937 ntBASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 RARRES2P1-201ENST00000474487 481 ntBASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 AC098818.2-201ENST00000564925 2320 ntBASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 AC018445.3-201ENST00000624177 1945 ntBASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 SMUG1P1-201ENST00000590640 811 ntBASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV34A0A0B4J273 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 SERBP1P1-201ENST00000396021 1160 ntBASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 BX005040.4-201ENST00000637145 1518 ntBASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV34A0A0B4J273 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 AL158211.5-201ENST00000623583 2518 ntBASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms