Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-4A0A0B4J246 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 LINC01006-201ENST00000333319 2292 ntBASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 AC053503.5-201ENST00000601508 636 ntBASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV8-4A0A0B4J246 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV8-4A0A0B4J246 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
TRAV8-4A0A0B4J246 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 AL049796.1-201ENST00000565336 1766 ntBASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 TPRG1LP1-201ENST00000598702 760 ntBASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-4A0A0B4J246 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms