Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-1A0A0B4J245 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV12-1A0A0B4J245 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV12-1A0A0B4J245 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
TRAV12-1A0A0B4J245 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV12-1A0A0B4J245 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.21□□□□□ -0.14
TRAV12-1A0A0B4J245 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.21□□□□□ -0.14
TRAV12-1A0A0B4J245 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 ABHD17AP3-201ENST00000503096 1137 ntBASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 PVT1-219ENST00000523427 938 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 AC010980.1-201ENST00000587192 1142 ntBASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 AC055733.4-201ENST00000638462 1354 ntBASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRAV12-1A0A0B4J245 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-1A0A0B4J245 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-1A0A0B4J245 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV12-1A0A0B4J245 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
TRAV12-1A0A0B4J245 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-1A0A0B4J245 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms