Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 AC012306.2-201ENST00000609350 630 ntBASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 AC079834.2-201ENST00000609776 1949 ntBASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 AL353807.1-201ENST00000427475 662 ntBASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 AC023632.3-201ENST00000521633 145 ntBASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC187A0A096LP49 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC187A0A096LP49 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC187A0A096LP49 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 AL355355.2-201ENST00000442321 338 ntBASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 KRT16P5-201ENST00000455284 522 ntBASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 AP003071.4-201ENST00000562276 1284 ntBASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC187A0A096LP49 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 HTR7P1-201ENST00000538670 1336 ntBASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 AF186192.3-201ENST00000583427 947 ntBASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC187A0A096LP49 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms