Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC008543.2-201ENST00000436907 1383 ntBASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 BCO2-201ENST00000357685 2930 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AP001442.1-206ENST00000600590 1573 ntTSL 5 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 GLDCP1-201ENST00000510885 2678 ntBASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 RNU4-59P-201ENST00000364447 116 ntBASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 MIR30C1-201ENST00000385227 89 ntBASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 SNORA35-201ENST00000386104 128 ntBASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AL772337.2-201ENST00000411992 981 ntTSL 3 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AC009110.1-201ENST00000415422 558 ntTSL 4 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AL031733.1-201ENST00000422817 455 ntBASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 OR10J1-201ENST00000423932 1090 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AC105942.1-202ENST00000438509 952 ntTSL 3 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AC090954.1-201ENST00000445502 361 ntBASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AC119428.2-201ENST00000449958 850 ntTSL 2 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 PTP4A2-201ENST00000457805 1032 ntTSL 2 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 RN7SL65P-201ENST00000485221 315 ntBASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 GUSBP3-201ENST00000509348 423 ntBASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 CASC16-201ENST00000510238 955 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 SNORA70.23-201ENST00000517218 151 ntBASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AC087627.1-201ENST00000522339 993 ntTSL 3 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 ATOX1-206ENST00000522710 591 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AC144548.1-201ENST00000549577 324 ntBASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AC025198.1-201ENST00000578331 419 ntBASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 WDR11-AS1-207ENST00000630905 769 ntTSL 2 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AC073488.5-201ENST00000631993 754 ntBASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AP000356.4-201ENST00000639500 172 ntBASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 AC024896.1-201ENST00000500632 2549 ntTSL 5 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 TRIM43-201ENST00000272395 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 C14orf2-203ENST00000553430 1659 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 PAPD4-204ENST00000453514 3523 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 CDY3P-201ENST00000454543 1618 ntBASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 CASR-201ENST00000490131 4015 ntTSL 5 BASIC7.59□□□□□ -1.19
NPIPA3F8WFD2 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
NPIPA3F8WFD2 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC7.59□□□□□ -1.2
NPIPA3F8WFD2 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
NPIPA3F8WFD2 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC7.59□□□□□ -1.2
NPIPA3F8WFD2 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 GBAP1-202ENST00000459805 2922 ntTSL 5 BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 MCC-209ENST00000515367 3844 ntTSL 5 BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 PACRG-203ENST00000366889 1503 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 NVL-202ENST00000340871 2431 ntTSL 2 BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 MKNK1-AS1-201ENST00000602433 2445 ntTSL 2 BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 GULP1-202ENST00000409580 3544 ntAPPRIS P3 TSL 2 BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 TAS2R5-201ENST00000247883 1151 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 CD244-201ENST00000322302 921 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 RNU1-47P-201ENST00000362966 163 ntBASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 S100A8-202ENST00000368733 523 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 GPN2-201ENST00000374133 715 ntTSL 3 BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 RFKP1-201ENST00000400940 428 ntBASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 PUDPP1-201ENST00000421058 495 ntBASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 AC007683.1-201ENST00000432746 591 ntBASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 HMGN2P24-201ENST00000433516 273 ntBASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 RPL15P1-201ENST00000439981 600 ntBASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 LIF-AS1-201ENST00000447565 808 ntTSL 3 BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 RPSAP54-201ENST00000454001 886 ntBASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 TXNP3-201ENST00000454560 301 ntBASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 RN7SL587P-201ENST00000459853 281 ntBASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 NUTF2P5-201ENST00000475013 379 ntBASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 OR9A3P-202ENST00000485185 878 ntBASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 AC114964.1-201ENST00000502306 1111 ntBASIC7.58□□□□□ -1.2
NPIPA3F8WFD2 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms