Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CICP10-201ENST00000439497 198 ntBASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 AP006193.1-201ENST00000440724 485 ntBASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 PPP1R8P1-201ENST00000452549 1044 ntBASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 DBIL5P-202ENST00000453414 250 ntBASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 RN7SL218P-201ENST00000464637 299 ntBASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 LINC02434-201ENST00000502419 677 ntTSL 3 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 CASC9-201ENST00000504531 1164 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 PPM1K-204ENST00000508256 923 ntTSL 2 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 RN7SKP197-201ENST00000517077 297 ntBASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 RNA5SP159-201ENST00000517161 103 ntBASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 IGHVII-22-1-201ENST00000517888 265 ntBASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 AC007728.2-202ENST00000567728 1150 ntTSL 3 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 AC009502.1-202ENST00000606673 602 ntTSL 3 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 CARMN-212ENST00000614896 536 ntTSL 5 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 MIR6505-201ENST00000617206 71 ntBASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 SRPK2-214ENST00000489828 2560 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 ABCA9-207ENST00000495634 1428 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 SLC8A1-209ENST00000408028 2898 ntTSL 5 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 MAPK10-255ENST00000641020 2412 ntBASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 ANKRD55-202ENST00000434982 1518 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 TMPRSS11B-201ENST00000332644 2671 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 RNASEH2B-AS1-209ENST00000631080 1707 ntTSL 5 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 AL445250.1-204ENST00000641775 1723 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 MICU1-204ENST00000418483 1212 ntTSL 2 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 RPL7P7-201ENST00000428803 703 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 AC068137.1-201ENST00000429272 584 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 HAUS1P2-201ENST00000439908 784 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 AC006355.1-201ENST00000440982 1012 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 AL356259.1-201ENST00000443554 1059 ntTSL 5 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 PSMA2-204ENST00000445517 683 ntTSL 2 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 AC018695.1-201ENST00000484096 664 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 RN7SL135P-201ENST00000490144 278 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 AC095050.1-201ENST00000502661 905 ntTSL 5 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 AC079795.1-201ENST00000508847 358 ntTSL 3 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 GNPDA1-212ENST00000513454 980 ntTSL 5 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 SCARNA20.3-201ENST00000516913 131 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 AC020688.1-201ENST00000519282 1248 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 KLF3P1-201ENST00000521506 1022 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 AP004245.1-201ENST00000530434 259 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 AC013452.1-201ENST00000560630 598 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 LINC02134-201ENST00000562980 557 ntTSL 5 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 MIR6872-201ENST00000612981 62 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 ST13-207ENST00000620312 944 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 AL136038.5-201ENST00000620835 554 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 BRD7P2-201ENST00000466133 1944 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 AC079777.1-201ENST00000623836 1953 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 EEF1A1P13-201ENST00000503537 1389 ntBASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 EHHADH-AS1-201ENST00000417720 1416 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 HELQ-201ENST00000295488 3579 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 DHRS9-202ENST00000412271 1465 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC7.67□□□□□ -1.18
NPIPA3F8WFD2 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 OPTN-202ENST00000378747 3400 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPIPA3F8WFD2 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms