Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CDC42BPBQ9Y5S2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC31.01■■■□□ 2.56
CDC42BPBQ9Y5S2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDC42BPBQ9Y5S2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
CDC42BPBQ9Y5S2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC31.01■■■□□ 2.55
CDC42BPBQ9Y5S2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDC42BPBQ9Y5S2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDC42BPBQ9Y5S2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDC42BPBQ9Y5S2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
CDC42BPBQ9Y5S2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC31.01■■■□□ 2.55
CDC42BPBQ9Y5S2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC31.01■■■□□ 2.55
CDC42BPBQ9Y5S2 AC023632.3-201ENST00000521633 145 ntBASIC31.01■■■□□ 2.55
CDC42BPBQ9Y5S2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
CDC42BPBQ9Y5S2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDC42BPBQ9Y5S2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CDC42BPBQ9Y5S2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC31■■■□□ 2.55
CDC42BPBQ9Y5S2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
CDC42BPBQ9Y5S2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC31■■■□□ 2.55
CDC42BPBQ9Y5S2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CDC42BPBQ9Y5S2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CDC42BPBQ9Y5S2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
CDC42BPBQ9Y5S2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC31■■■□□ 2.55
CDC42BPBQ9Y5S2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC31■■■□□ 2.55
CDC42BPBQ9Y5S2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CDC42BPBQ9Y5S2 HTR7P1-201ENST00000538670 1336 ntBASIC30.99■■■□□ 2.55
CDC42BPBQ9Y5S2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CDC42BPBQ9Y5S2 NBPF21P-201ENST00000425093 1451 ntBASIC30.99■■■□□ 2.55
CDC42BPBQ9Y5S2 AC079598.2-202ENST00000546624 1451 ntBASIC30.99■■■□□ 2.55
CDC42BPBQ9Y5S2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CDC42BPBQ9Y5S2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CDC42BPBQ9Y5S2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CDC42BPBQ9Y5S2 RBM17P1-201ENST00000453646 1190 ntBASIC30.98■■■□□ 2.55
CDC42BPBQ9Y5S2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC30.98■■■□□ 2.55
CDC42BPBQ9Y5S2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC30.98■■■□□ 2.55
CDC42BPBQ9Y5S2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
CDC42BPBQ9Y5S2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC30.98■■■□□ 2.55
CDC42BPBQ9Y5S2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CDC42BPBQ9Y5S2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CDC42BPBQ9Y5S2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC30.98■■■□□ 2.55
CDC42BPBQ9Y5S2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC30.98■■■□□ 2.55
CDC42BPBQ9Y5S2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
CDC42BPBQ9Y5S2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
CDC42BPBQ9Y5S2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC30.98■■■□□ 2.55
CDC42BPBQ9Y5S2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC30.98■■■□□ 2.55
CDC42BPBQ9Y5S2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CDC42BPBQ9Y5S2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 FAM197Y1-201ENST00000421178 764 ntBASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 AC145285.6-201ENST00000604632 637 ntBASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CDC42BPBQ9Y5S2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CDC42BPBQ9Y5S2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CDC42BPBQ9Y5S2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDC42BPBQ9Y5S2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDC42BPBQ9Y5S2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC30.96■■■□□ 2.55
CDC42BPBQ9Y5S2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC30.96■■■□□ 2.55
CDC42BPBQ9Y5S2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
CDC42BPBQ9Y5S2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
CDC42BPBQ9Y5S2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDC42BPBQ9Y5S2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDC42BPBQ9Y5S2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDC42BPBQ9Y5S2 PTBP1P-201ENST00000554374 1601 ntBASIC30.96■■■□□ 2.55
CDC42BPBQ9Y5S2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC30.95■■■□□ 2.55
CDC42BPBQ9Y5S2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
CDC42BPBQ9Y5S2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CDC42BPBQ9Y5S2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC30.95■■■□□ 2.55
CDC42BPBQ9Y5S2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
CDC42BPBQ9Y5S2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.55
CDC42BPBQ9Y5S2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
CDC42BPBQ9Y5S2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CDC42BPBQ9Y5S2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC30.95■■■□□ 2.54
CDC42BPBQ9Y5S2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CDC42BPBQ9Y5S2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CDC42BPBQ9Y5S2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC30.95■■■□□ 2.54
CDC42BPBQ9Y5S2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC30.95■■■□□ 2.54
CDC42BPBQ9Y5S2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC30.95■■■□□ 2.54
CDC42BPBQ9Y5S2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CDC42BPBQ9Y5S2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC30.95■■■□□ 2.54
CDC42BPBQ9Y5S2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC30.94■■■□□ 2.54
CDC42BPBQ9Y5S2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
CDC42BPBQ9Y5S2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC30.94■■■□□ 2.54
CDC42BPBQ9Y5S2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC30.94■■■□□ 2.54
CDC42BPBQ9Y5S2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
CDC42BPBQ9Y5S2 GUSBP5-202ENST00000510805 1989 ntBASIC30.94■■■□□ 2.54
CDC42BPBQ9Y5S2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC30.93■■■□□ 2.54
CDC42BPBQ9Y5S2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC30.93■■■□□ 2.54
CDC42BPBQ9Y5S2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC30.93■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms