Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PCDHGB3Q9Y5G1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB3Q9Y5G1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGB3Q9Y5G1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB3Q9Y5G1 AL391422.3-201ENST00000603791 2761 ntBASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 SLC7A5P2-201ENST00000553010 536 ntBASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGB3Q9Y5G1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 AC011767.1-201ENST00000617410 1153 ntBASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB3Q9Y5G1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
PCDHGB3Q9Y5G1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 AC243732.1-201ENST00000612648 864 ntBASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGB3Q9Y5G1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms