Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.76■□□□□ 0.43
RHBDD3Q9Y3P4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.76■□□□□ 0.43
RHBDD3Q9Y3P4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.76■□□□□ 0.43
RHBDD3Q9Y3P4 NTF6G-201ENST00000591094 616 ntBASIC17.76■□□□□ 0.43
RHBDD3Q9Y3P4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.76■□□□□ 0.43
RHBDD3Q9Y3P4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDD3Q9Y3P4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RHBDD3Q9Y3P4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RHBDD3Q9Y3P4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDD3Q9Y3P4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 AC112907.3-201ENST00000577781 2400 ntBASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDD3Q9Y3P4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDD3Q9Y3P4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 PCDHAC2-203ENST00000615316 3011 ntBASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.72■□□□□ 0.43
RHBDD3Q9Y3P4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms