Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2D4Q9Y2X8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 AL020996.1-203ENST00000536896 2307 ntBASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.11□□□□□ -0.15
UBE2D4Q9Y2X8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 AC116050.2-201ENST00000612102 1779 ntBASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D4Q9Y2X8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 KRT16P2-201ENST00000414673 1423 ntBASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D4Q9Y2X8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBE2D4Q9Y2X8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBE2D4Q9Y2X8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D4Q9Y2X8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms