Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 MIR4758-201ENST00000577688 71 ntBASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 AC100791.3-201ENST00000617619 330 ntBASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPH3AQ9Y2J0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RPH3AQ9Y2J0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPH3AQ9Y2J0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.56■□□□□ 0.56
RPH3AQ9Y2J0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPH3AQ9Y2J0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
RPH3AQ9Y2J0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPH3AQ9Y2J0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.56■□□□□ 0.56
RPH3AQ9Y2J0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.56■□□□□ 0.56
RPH3AQ9Y2J0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.56■□□□□ 0.56
RPH3AQ9Y2J0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPH3AQ9Y2J0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.56■□□□□ 0.56
RPH3AQ9Y2J0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPH3AQ9Y2J0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.56■□□□□ 0.56
RPH3AQ9Y2J0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.56■□□□□ 0.56
RPH3AQ9Y2J0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPH3AQ9Y2J0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 KRT18P68-201ENST00000392293 1000 ntBASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 MIR4651-201ENST00000582622 73 ntBASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPH3AQ9Y2J0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 AC069152.1-201ENST00000438030 544 ntBASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 AC133041.1-202ENST00000642053 222 ntBASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPH3AQ9Y2J0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms