Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD7Q9P2D1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD7Q9P2D1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD7Q9P2D1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHD7Q9P2D1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.75■■□□□ 1.07
CHD7Q9P2D1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.74■■□□□ 1.07
CHD7Q9P2D1 AC073195.1-201ENST00000607241 877 ntBASIC21.74■■□□□ 1.07
CHD7Q9P2D1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD7Q9P2D1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHD7Q9P2D1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD7Q9P2D1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.74■■□□□ 1.07
CHD7Q9P2D1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHD7Q9P2D1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.74■■□□□ 1.07
CHD7Q9P2D1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CHD7Q9P2D1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.74■■□□□ 1.07
CHD7Q9P2D1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.74■■□□□ 1.07
CHD7Q9P2D1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CHD7Q9P2D1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CHD7Q9P2D1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.73■■□□□ 1.07
CHD7Q9P2D1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.73■■□□□ 1.07
CHD7Q9P2D1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHD7Q9P2D1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CHD7Q9P2D1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHD7Q9P2D1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.73■■□□□ 1.07
CHD7Q9P2D1 HTR7P1-201ENST00000538670 1336 ntBASIC21.73■■□□□ 1.07
CHD7Q9P2D1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHD7Q9P2D1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.73■■□□□ 1.07
CHD7Q9P2D1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.73■■□□□ 1.07
CHD7Q9P2D1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CHD7Q9P2D1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHD7Q9P2D1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CHD7Q9P2D1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHD7Q9P2D1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CHD7Q9P2D1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.72■■□□□ 1.07
CHD7Q9P2D1 MYC-208ENST00000641036 567 ntBASIC21.72■■□□□ 1.07
CHD7Q9P2D1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 MIR1238-201ENST00000408483 83 ntBASIC21.71■■□□□ 1.07
CHD7Q9P2D1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD7Q9P2D1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHD7Q9P2D1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.7■■□□□ 1.06
CHD7Q9P2D1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.7■■□□□ 1.06
CHD7Q9P2D1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.7■■□□□ 1.06
CHD7Q9P2D1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.7■■□□□ 1.06
CHD7Q9P2D1 AC087388.1-201ENST00000571370 1112 ntBASIC21.7■■□□□ 1.06
CHD7Q9P2D1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.7■■□□□ 1.06
CHD7Q9P2D1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHD7Q9P2D1 FITM1-202ENST00000559294 800 ntBASIC21.7■■□□□ 1.06
CHD7Q9P2D1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.7■■□□□ 1.06
CHD7Q9P2D1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHD7Q9P2D1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD7Q9P2D1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHD7Q9P2D1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.69■■□□□ 1.06
CHD7Q9P2D1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.69■■□□□ 1.06
CHD7Q9P2D1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.69■■□□□ 1.06
CHD7Q9P2D1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHD7Q9P2D1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHD7Q9P2D1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHD7Q9P2D1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.69■■□□□ 1.06
CHD7Q9P2D1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.69■■□□□ 1.06
CHD7Q9P2D1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.69■■□□□ 1.06
CHD7Q9P2D1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms