Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCKIPSDQ9NZQ3 AC092667.1-201ENST00000434301 2586 ntBASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 AP005212.1-201ENST00000581547 1997 ntBASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 AC016405.3-201ENST00000607710 860 ntBASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCKIPSDQ9NZQ3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 RBM17P2-201ENST00000616397 1405 ntBASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 POU5F1P3-201ENST00000428824 1078 ntBASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 AC098934.4-201ENST00000564127 592 ntBASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 MIR4651-201ENST00000582622 73 ntBASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.48■□□□□ 0.87
NCKIPSDQ9NZQ3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 BX276092.2-201ENST00000417668 665 ntBASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 RNA5SP413-201ENST00000516373 109 ntBASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 AC066615.1-201ENST00000640911 628 ntBASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 AC121338.2-201ENST00000622535 1744 ntBASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCKIPSDQ9NZQ3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NCKIPSDQ9NZQ3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCKIPSDQ9NZQ3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NCKIPSDQ9NZQ3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NCKIPSDQ9NZQ3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
NCKIPSDQ9NZQ3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
NCKIPSDQ9NZQ3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NCKIPSDQ9NZQ3 AC093787.1-201ENST00000450396 207 ntBASIC20.46■□□□□ 0.87
NCKIPSDQ9NZQ3 AC097658.1-201ENST00000475555 843 ntBASIC20.46■□□□□ 0.87
NCKIPSDQ9NZQ3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCKIPSDQ9NZQ3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms