Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 AC092720.2-201ENST00000602388 1665 ntBASIC20.69■□□□□ 0.9
UBP1Q9NZI7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 CDCA4P2-201ENST00000441182 718 ntBASIC20.68■□□□□ 0.9
UBP1Q9NZI7 RARRES2P4-201ENST00000514074 484 ntBASIC20.68■□□□□ 0.9
UBP1Q9NZI7 AL162412.1-201ENST00000567129 965 ntBASIC20.68■□□□□ 0.9
UBP1Q9NZI7 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBP1Q9NZI7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 CYP21A1P-202ENST00000354927 1481 ntBASIC20.67■□□□□ 0.9
UBP1Q9NZI7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
UBP1Q9NZI7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 AC005181.1-201ENST00000604782 1256 ntBASIC20.66■□□□□ 0.9
UBP1Q9NZI7 AC092666.2-201ENST00000613287 246 ntBASIC20.66■□□□□ 0.9
UBP1Q9NZI7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 AC112907.3-201ENST00000577781 2400 ntBASIC20.66■□□□□ 0.9
UBP1Q9NZI7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBP1Q9NZI7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBP1Q9NZI7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBP1Q9NZI7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.65■□□□□ 0.9
UBP1Q9NZI7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
UBP1Q9NZI7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.65■□□□□ 0.9
UBP1Q9NZI7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBP1Q9NZI7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBP1Q9NZI7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBP1Q9NZI7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.65■□□□□ 0.9
UBP1Q9NZI7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBP1Q9NZI7 KRT8P36-201ENST00000489121 1440 ntBASIC20.65■□□□□ 0.9
UBP1Q9NZI7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBP1Q9NZI7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
UBP1Q9NZI7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBP1Q9NZI7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBP1Q9NZI7 SMG8-203ENST00000578922 2178 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms