Protein–RNA interactions for Protein: Q9NYF3

FAM53C, Protein FAM53C, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53CQ9NYF3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 AC068587.7-201ENST00000641602 218 ntBASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.8■□□□□ 0.92
FAM53CQ9NYF3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.79■□□□□ 0.92
FAM53CQ9NYF3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FAM53CQ9NYF3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.79■□□□□ 0.92
FAM53CQ9NYF3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.79■□□□□ 0.92
FAM53CQ9NYF3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
FAM53CQ9NYF3 MIR6722-201ENST00000617286 78 ntBASIC20.79■□□□□ 0.92
FAM53CQ9NYF3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.79■□□□□ 0.92
FAM53CQ9NYF3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FAM53CQ9NYF3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.79■□□□□ 0.92
FAM53CQ9NYF3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FAM53CQ9NYF3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FAM53CQ9NYF3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 AC090164.3-201ENST00000610780 2143 ntBASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FAM53CQ9NYF3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 Z92544.1-202ENST00000571933 1220 ntBASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 PRORSD1P-202ENST00000563365 2154 ntBASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FAM53CQ9NYF3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
FAM53CQ9NYF3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 AC099398.1-201ENST00000567919 2776 ntBASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FAM53CQ9NYF3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
FAM53CQ9NYF3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FAM53CQ9NYF3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms