Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
THUMPD1Q9NXG2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
THUMPD1Q9NXG2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
THUMPD1Q9NXG2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
THUMPD1Q9NXG2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
THUMPD1Q9NXG2 KRT19P1-201ENST00000405746 1186 ntBASIC19.07■□□□□ 0.64
THUMPD1Q9NXG2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
THUMPD1Q9NXG2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.07■□□□□ 0.64
THUMPD1Q9NXG2 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.07■□□□□ 0.64
THUMPD1Q9NXG2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.07■□□□□ 0.64
THUMPD1Q9NXG2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
THUMPD1Q9NXG2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
THUMPD1Q9NXG2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
THUMPD1Q9NXG2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
THUMPD1Q9NXG2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.06■□□□□ 0.64
THUMPD1Q9NXG2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 AC007322.3-201ENST00000426526 701 ntBASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 RBM17P2-201ENST00000616397 1405 ntBASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THUMPD1Q9NXG2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 AC091799.1-201ENST00000422823 811 ntBASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 FAM21FP-204ENST00000608637 956 ntBASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
THUMPD1Q9NXG2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
THUMPD1Q9NXG2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.03■□□□□ 0.64
THUMPD1Q9NXG2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
THUMPD1Q9NXG2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
THUMPD1Q9NXG2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
THUMPD1Q9NXG2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
THUMPD1Q9NXG2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
THUMPD1Q9NXG2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
THUMPD1Q9NXG2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.03■□□□□ 0.64
THUMPD1Q9NXG2 CDV3P1-201ENST00000471403 739 ntBASIC19.03■□□□□ 0.64
THUMPD1Q9NXG2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
THUMPD1Q9NXG2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
THUMPD1Q9NXG2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
THUMPD1Q9NXG2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.03■□□□□ 0.64
THUMPD1Q9NXG2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms