Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 AL049796.1-201ENST00000565336 1766 ntBASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN3Q9NQS3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 AL162412.1-201ENST00000567129 965 ntBASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 AL121832.2-201ENST00000610979 668 ntBASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.41■□□□□ 0.7
NECTIN3Q9NQS3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 AC083906.2-201ENST00000511578 360 ntBASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NECTIN3Q9NQS3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
NECTIN3Q9NQS3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NECTIN3Q9NQS3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 ID1-201ENST00000376105 1233 ntBASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 HLA-L-209ENST00000420110 1011 ntBASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 CDV3P1-201ENST00000471403 739 ntBASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 AC133552.2-202ENST00000575694 574 ntBASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 AC069236.1-201ENST00000604339 616 ntBASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.39■□□□□ 0.69
NECTIN3Q9NQS3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 GPX1P1-201ENST00000388829 606 ntBASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 AC007322.3-201ENST00000426526 701 ntBASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 AC093787.1-201ENST00000450396 207 ntBASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 RARRES2P4-201ENST00000514074 484 ntBASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 AF201337.1-201ENST00000520239 748 ntBASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms