Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 AC087289.5-201ENST00000586076 3175 ntBASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLK4Q9HAZ1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 RARRES2P11-201ENST00000635158 484 ntBASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 AP005212.1-201ENST00000581547 1997 ntBASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.68■□□□□ 0.74
CLK4Q9HAZ1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 AC007322.1-201ENST00000426983 750 ntBASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 AC073111.5-205ENST00000641717 521 ntBASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.67■□□□□ 0.74
CLK4Q9HAZ1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 AC026185.1-201ENST00000445748 174 ntBASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.66■□□□□ 0.74
CLK4Q9HAZ1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms